RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 DGLUCYQ7Z3D6 616 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 SPRED2Q7Z698 418 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 RNF135Q8IUD6 432 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 VWCEQ96DN2 955 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 MMP19Q99542 508 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 SUGCTQ9HAC7 445 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 TLR9Q9NR96 1032 aa14.66□□□□□ -0.06
SFXN1-210ENST00000513725 ZNFX1Q9P2E3 1918 aaKnown RBP14.65□□□□□ -0.06
SFXN1-210ENST00000513725 SIPA1L1O43166 1804 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 ZBTB22O15209 634 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 PGK2P07205 417 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 PHKA1P46020 1223 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 DEFB128Q7Z7B8 93 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 SLC43A3Q8NBI5 491 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 SEZ6LQ9BYH1 1024 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 ATRXP46100 2492 aa14.65□□□□□ -0.06
SFXN1-210ENST00000513725 CACNA1FO60840 1977 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 GJA9P57773 515 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 IRX5P78411 483 aaPredicted RBP14.64□□□□□ -0.07
SFXN1-210ENST00000513725 KCTD2Q14681 263 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 NBPF20Q3BBV1 942 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 ZNF792Q3KQV3 632 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 TSR2Q969E8 191 aaKnown RBP14.64□□□□□ -0.07
SFXN1-210ENST00000513725 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
SFXN1-210ENST00000513725 ZHX1Q9UKY1 873 aaPredicted RBP14.64□□□□□ -0.07
SFXN1-210ENST00000513725 NCOR2Q9Y618 2525 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 EYA2O00167 538 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 SLC25A27O95847 323 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 NBL1P41271 181 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 NUBP1P53384 320 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 ATF7IPQ6VMQ6 1270 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 EP400NLQ6ZTU2 488 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 MSL3Q8N5Y2 521 aaKnown RBP14.63□□□□□ -0.07
SFXN1-210ENST00000513725 TANGO6Q9C0B7 1094 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 TRPV6Q9H1D0 765 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 UPF3AQ9H1J1 476 aaKnown RBP14.63□□□□□ -0.07
SFXN1-210ENST00000513725 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 MTUS1Q9ULD2 1270 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 DNAH14Q0VDD8 3507 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 GVINP1Q7Z2Y8 2422 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 PDS5AQ29RF7 1337 aaKnown RBP14.63□□□□□ -0.07
SFXN1-210ENST00000513725 CHD6Q8TD26 2715 aa14.63□□□□□ -0.07
SFXN1-210ENST00000513725 B4GALT4O60513 344 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 CABYRO75952 493 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 NBPF7P0C2Y1 421 aaPredicted RBP14.62□□□□□ -0.07
SFXN1-210ENST00000513725 AVPR2P30518 371 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 VCPP55072 806 aaKnown RBP14.62□□□□□ -0.07
SFXN1-210ENST00000513725 ITGA7Q13683 1181 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 ADSSL1Q8N142 457 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 PABPC5Q96DU9 382 aaKnown RBP14.62□□□□□ -0.07
SFXN1-210ENST00000513725 TGS1Q96RS0 853 aaKnown RBP14.62□□□□□ -0.07
SFXN1-210ENST00000513725 NOL10Q9BSC4 688 aaKnown RBP14.62□□□□□ -0.07
SFXN1-210ENST00000513725 SRCIN1Q9C0H9 1055 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 SIL1Q9H173 461 aa14.62□□□□□ -0.07
SFXN1-210ENST00000513725 CFAP47Q6ZTR5 3102 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 LCHNA4D1U4 455 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 KDM4AO75164 1064 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 HLA-DOAP06340 250 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 RFC2P35250 354 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ERVK-21P61565 698 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 RASGRF1Q13972 1273 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 COL9A2Q14055 689 aaPredicted RBP14.61□□□□□ -0.07
SFXN1-210ENST00000513725 CCDC102BQ68D86 513 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ANKRD44Q8N8A2 993 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ACER1Q8TDN7 264 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ZNF384Q8TF68 577 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 NKD2Q969F2 451 aaPredicted RBP14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ZBED2Q9BTP6 218 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 ACACBO00763 2458 aa14.61□□□□□ -0.07
SFXN1-210ENST00000513725 KCNJ6P48051 423 aa14.6□□□□□ -0.07
SFXN1-210ENST00000513725 ZXDAP98168 799 aa14.6□□□□□ -0.07
SFXN1-210ENST00000513725 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
SFXN1-210ENST00000513725 PTPROQ16827 1216 aa14.6□□□□□ -0.07
SFXN1-210ENST00000513725 SLC4A10Q6U841 1118 aa14.6□□□□□ -0.07
SFXN1-210ENST00000513725 CXCL17Q6UXB2 119 aa14.6□□□□□ -0.07
SFXN1-210ENST00000513725 PALD1Q9ULE6 856 aa14.6□□□□□ -0.07
SFXN1-210ENST00000513725 APAF1O14727 1248 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 BAIAP3O94812 1187 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
SFXN1-210ENST00000513725 DSG3P32926 999 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 TIGD5Q53EQ6 642 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 NSUN4Q96CB9 384 aaKnown RBP14.59□□□□□ -0.07
SFXN1-210ENST00000513725 RMDN1Q96DB5 314 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 MRPL38Q96DV4 380 aaKnown RBP14.59□□□□□ -0.07
SFXN1-210ENST00000513725 FTOQ9C0B1 505 aaKnown RBP eCLIP14.59□□□□□ -0.07
SFXN1-210ENST00000513725 CEP126Q9P2H0 1117 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 VPS13AQ96RL7 3174 aa14.59□□□□□ -0.07
SFXN1-210ENST00000513725 A0A1B0GUL7 405 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 GALR2O43603 387 aaPredicted RBP14.58□□□□□ -0.08
SFXN1-210ENST00000513725 BAG3O95817 575 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 SUPT20HL2P0C7V6 817 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 PLCG2P16885 1265 aa14.58□□□□□ -0.08
SFXN1-210ENST00000513725 ACVR2BQ13705 512 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms