RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 COBLO75128 1261 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 INHAP05111 366 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 RGS2P41220 211 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 STAT2P52630 851 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 OAZ1P54368 228 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 PLS1Q14651 629 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 TTBK2Q6IQ55 1244 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 KCTD1Q719H9 257 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 TRIB2Q92519 343 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 KIFC2Q96AC6 838 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 RIPK3Q9Y572 518 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 ZNF536O15090 1300 aa13.82□□□□□ -0.2
HMGXB3-203ENST00000510472 BRCA2P51587 3418 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 SLC27A2O14975 620 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 ZBED4O75132 1171 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 HMGCRP04035 888 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 UBXN2AP68543 259 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 TRIM32Q13049 653 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 CCL14Q16627 93 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 NCAPG2Q86XI2 1143 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 TRMT44Q8IYL2 757 aaKnown RBP13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 NPLOC4Q8TAT6 608 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 APBA2Q99767 749 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 PRR12Q9ULL5 1215 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
HMGXB3-203ENST00000510472 GJB1P08034 283 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 CCL5P13501 91 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 EN2P19622 333 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 ADORA2AP29274 412 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 COPB2P35606 906 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 ANTXR2P58335 489 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 TRDNQ13061 729 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 WDR78Q5VTH9 848 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 CREB3L3Q68CJ9 461 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 MB21D2Q8IYB1 491 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 NCOA7Q8NI08 942 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 UNC93B1Q9H1C4 597 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 RAVER2Q9HCJ3 691 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 PAK6Q9NQU5 681 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 FLRT1Q9NZU1 646 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 BIN2Q9UBW5 565 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 IVNS1ABPQ9Y6Y0 642 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 TNKSO95271 1327 aa13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-203ENST00000510472 MGAMO43451 1857 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 MYCP01106 439 aaPredicted RBP13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 FCER1AP12319 257 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 SLC16A2P36021 539 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 SNRNP48Q6IEG0 339 aaKnown RBP13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 CPXCR1Q8N123 301 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 KCNB2Q92953 911 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 RNF208Q9H0X6 261 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
HMGXB3-203ENST00000510472 PLXNB2O15031 1838 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 GJA8P48165 433 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 CACNB2Q08289 660 aaPredicted RBP13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 CCDC96Q2M329 555 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 ZNF792Q3KQV3 632 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 OLFML2BQ68BL8 750 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 AGBL1Q96MI9 1066 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 CRISPLD2Q9H0B8 497 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 CWC22Q9HCG8 908 aaKnown RBP13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 MTMR7Q9Y216 660 aa13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 FRMPD2Q68DX3 1309 aaPredicted RBP13.78□□□□□ -0.2
HMGXB3-203ENST00000510472 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 SNAP25P60880 206 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 IFIT1BQ5T764 474 aaKnown RBP13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 RALYLQ86SE5 291 aaKnown RBP13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 MMP19Q99542 508 aa13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
HMGXB3-203ENST00000510472 MKI67P46013 3256 aaKnown RBP13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 IFIT3O14879 490 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms