RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 MMP19Q99542 508 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 PRRX2Q99811 253 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 NOL10Q9BSC4 688 aaKnown RBP13.31□□□□□ -0.28
SNF8-207ENST00000509995 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.288e-6■■■■□ 21.3
SNF8-207ENST00000509995 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 EPG5Q9HCE0 2579 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 PLXNA3P51805 1871 aa13.31□□□□□ -0.28
SNF8-207ENST00000509995 PFKMP08237 780 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 PLCG2P16885 1265 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 ZP2Q05996 745 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 IER5LQ5T953 404 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 TATDN1Q6P1N9 297 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 SCLYQ96I15 445 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
SNF8-207ENST00000509995 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
SNF8-207ENST00000509995 SAP30BPQ9UHR5 308 aaKnown RBP13.3□□□□□ -0.28
SNF8-207ENST00000509995 ZHX1Q9UKY1 873 aaPredicted RBP13.3□□□□□ -0.28
SNF8-207ENST00000509995 SIP14410 1827 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 ADCY6O43306 1168 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 BAG3O95817 575 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 SLC25A27O95847 323 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 GJA9P57773 515 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
SNF8-207ENST00000509995 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
SNF8-207ENST00000509995 GNASQ5JWF2 1037 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
SNF8-207ENST00000509995 PHOSPHO2Q8TCD6 241 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 FAM86C1Q9NVL1 165 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 HMG20BQ9P0W2 317 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
SNF8-207ENST00000509995 KIF28PB7ZC32 967 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 DSG3P32926 999 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 IL15P40933 162 aaPredicted RBP13.28□□□□□ -0.28
SNF8-207ENST00000509995 KCTD2Q14681 263 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 HERC6Q8IVU3 1022 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 SPATA5Q8NB90 893 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 ATG4CQ96DT6 458 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 PRKAG3Q9UGI9 489 aa13.28□□□□□ -0.28
SNF8-207ENST00000509995 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 CTAGE5O15320 804 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 B4GALT4O60513 344 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 FLOT1O75955 427 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 SNAI1O95863 264 aaPredicted RBP13.27□□□□□ -0.29
SNF8-207ENST00000509995 ACTN1P12814 892 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 PPP4CP60510 307 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 TIMM10P62072 90 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 MVPQ14764 893 aaKnown RBP13.27□□□□□ -0.29
SNF8-207ENST00000509995 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
SNF8-207ENST00000509995 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 XAGE2Q96GT9 111 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 USP44Q9H0E7 712 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.29
SNF8-207ENST00000509995 TET1Q8NFU7 2136 aa13.27□□□□□ -0.29
SNF8-207ENST00000509995 GUCY1A2P33402 732 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 MAMDC4Q6UXC1 1216 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 BMP8AQ7Z5Y6 402 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 UPF3BQ9BZI7 483 aaKnown RBP13.26□□□□□ -0.29
SNF8-207ENST00000509995 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 CABP5Q9NP86 173 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 LRP2BPQ9P2M1 347 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 SERPINB13Q9UIV8 391 aa13.26□□□□□ -0.29
SNF8-207ENST00000509995 MYO5AQ9Y4I1 1855 aaKnown RBP13.26□□□□□ -0.29
SNF8-207ENST00000509995 A0A1B0GUL7 405 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 A0A1W2PRG0 241 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
SNF8-207ENST00000509995 IRS1P35568 1242 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 NKX3-2P78367 333 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 ITGA7Q13683 1181 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 PKN1Q16512 942 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 HERC4Q5GLZ8 1057 aaPredicted RBP13.25□□□□□ -0.29
SNF8-207ENST00000509995 NAA16Q6N069 864 aaPredicted RBP13.25□□□□□ -0.29
SNF8-207ENST00000509995 CXCL17Q6UXB2 119 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 ADGRA1Q86SQ6 560 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 ADHFE1Q8IWW8 467 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 EHD4Q9H223 541 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 MUTYHQ9UIF7 546 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 FAM50BQ9Y247 325 aa13.25□□□□□ -0.29
SNF8-207ENST00000509995 GVINP1Q7Z2Y8 2422 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 DMXL1Q9Y485 3027 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 GRIN2DO15399 1336 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 LCHNA4D1U4 455 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 CABYRO75952 493 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 KRT37O76014 449 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 ACVR2BQ13705 512 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 SEPT2Q15019 361 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 CCDC144BQ3MJ40 725 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 KIAA1755Q5JYT7 1200 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 SEZ6LQ9BYH1 1024 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
SNF8-207ENST00000509995 ALG13Q9NP73 1137 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms