RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MYH4Q9Y623 1939 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 PLXNB2O15031 1838 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 PARP14Q460N5 1801 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 SGSM2O43147 1006 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 ADORA2AP29274 412 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 BMP2KLQ5H9B9 411 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 DGKHQ86XP1 1220 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 KIFC2Q96AC6 838 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 CCDC136Q96JN2 1154 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 SLC38A10Q9HBR0 1119 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 U3KPZ7 1027 aaPredicted RBP23.42■■□□□ 1.34
SFXN1-209ENST00000508290 LAMA4Q16363 1823 aa23.42■■□□□ 1.34
SFXN1-209ENST00000508290 KIAA0100Q14667 2235 aaKnown RBP23.41■■□□□ 1.34
SFXN1-209ENST00000508290 NMT2O60551 498 aa23.41■■□□□ 1.34
SFXN1-209ENST00000508290 KCTD2Q14681 263 aa23.41■■□□□ 1.34
SFXN1-209ENST00000508290 OLFML2BQ68BL8 750 aa23.41■■□□□ 1.34
SFXN1-209ENST00000508290 FBXO40Q9UH90 709 aa23.41■■□□□ 1.34
SFXN1-209ENST00000508290 TMEM232C9JQI7 657 aa23.4■■□□□ 1.34
SFXN1-209ENST00000508290 PRKAR2AP13861 404 aaKnown RBP23.4■■□□□ 1.34
SFXN1-209ENST00000508290 TMEM47Q9BQJ4 181 aa23.4■■□□□ 1.34
SFXN1-209ENST00000508290 ISY1Q9ULR0 285 aaKnown RBP23.4■■□□□ 1.34
SFXN1-209ENST00000508290 NEDD4P46934 1319 aa23.39■■□□□ 1.34
SFXN1-209ENST00000508290 DOCK3Q8IZD9 2030 aa23.39■■□□□ 1.34
SFXN1-209ENST00000508290 MCCP23508 829 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 TRDNQ13061 729 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 IKQ13123 557 aaPredicted RBP23.39■■□□□ 1.33
SFXN1-209ENST00000508290 SNRNP48Q6IEG0 339 aaKnown RBP23.39■■□□□ 1.33
SFXN1-209ENST00000508290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.39■■□□□ 1.33
SFXN1-209ENST00000508290 ANKLE1Q8NAG6 615 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 SHISA4Q96DD7 197 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 DEFB118Q96PH6 123 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 MMP19Q99542 508 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 CRISPLD2Q9H0B8 497 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 PNMA2Q9UL42 364 aa23.39■■□□□ 1.33
SFXN1-209ENST00000508290 DIS3Q9Y2L1 958 aaKnown RBP23.39■■□□□ 1.33
SFXN1-209ENST00000508290 KIAA1211Q6ZU35 1233 aa23.38■■□□□ 1.33
SFXN1-209ENST00000508290 IL25Q9H293 177 aa23.38■■□□□ 1.33
SFXN1-209ENST00000508290 MSCO60682 206 aa23.37■■□□□ 1.33
SFXN1-209ENST00000508290 KDM4AO75164 1064 aa23.37■■□□□ 1.33
SFXN1-209ENST00000508290 CACNB2Q08289 660 aaPredicted RBP23.37■■□□□ 1.33
SFXN1-209ENST00000508290 CHST13Q8NET6 341 aa23.37■■□□□ 1.33
SFXN1-209ENST00000508290 ANKS1AQ92625 1134 aa23.37■■□□□ 1.33
SFXN1-209ENST00000508290 TFRCP02786 760 aaKnown RBP23.36■■□□□ 1.33
SFXN1-209ENST00000508290 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
SFXN1-209ENST00000508290 CCL14Q16627 93 aa23.36■■□□□ 1.33
SFXN1-209ENST00000508290 CCDC96Q2M329 555 aa23.36■■□□□ 1.33
SFXN1-209ENST00000508290 TKFCQ3LXA3 575 aa23.36■■□□□ 1.33
SFXN1-209ENST00000508290 GPATCH4Q5T3I0 446 aaKnown RBP23.36■■□□□ 1.33
SFXN1-209ENST00000508290 ERICH6BQ5W0A0 696 aa23.36■■□□□ 1.33
SFXN1-209ENST00000508290 BTNL9Q6UXG8 535 aa23.36■■□□□ 1.33
SFXN1-209ENST00000508290 UBAC1Q9BSL1 405 aa23.36■■□□□ 1.33
SFXN1-209ENST00000508290 IGHA2P01877 340 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 TRIM32Q13049 653 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 CASC1Q6TDU7 716 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 KCTD1Q719H9 257 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 CPXCR1Q8N123 301 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 MSL3Q8N5Y2 521 aaKnown RBP23.35■■□□□ 1.33
SFXN1-209ENST00000508290 NPLOC4Q8TAT6 608 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 MAP4K1Q92918 833 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 ZSCAN10Q96SZ4 725 aaPredicted RBP23.35■■□□□ 1.33
SFXN1-209ENST00000508290 NRBP1Q9UHY1 535 aa23.35■■□□□ 1.33
SFXN1-209ENST00000508290 B4E1Z4 1266 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 FARP2O94887 1054 aaPredicted RBP23.34■■□□□ 1.33
SFXN1-209ENST00000508290 SNHG28P0DPA3 235 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 PDHBP11177 359 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 UBE2Q1Q7Z7E8 422 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 HTATIP2Q9BUP3 242 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 KAT14Q9H8E8 782 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 ZSWIM5Q9P217 1185 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 PRR12Q9ULL5 1215 aa23.34■■□□□ 1.33
SFXN1-209ENST00000508290 COBLO75128 1261 aa23.33■■□□□ 1.33
SFXN1-209ENST00000508290 DDX11Q96FC9 970 aa23.33■■□□□ 1.33
SFXN1-209ENST00000508290 MAML3Q96JK9 1138 aa23.33■■□□□ 1.33
SFXN1-209ENST00000508290 RAVER2Q9HCJ3 691 aaKnown RBP23.33■■□□□ 1.33
SFXN1-209ENST00000508290 FLRT1Q9NZU1 646 aa23.33■■□□□ 1.33
SFXN1-209ENST00000508290 OGDHLQ9ULD0 1010 aa23.33■■□□□ 1.33
SFXN1-209ENST00000508290 BRCA2P51587 3418 aa23.32■■□□□ 1.32
SFXN1-209ENST00000508290 COL11A1P12107 1806 aaPredicted RBP23.32■■□□□ 1.32
SFXN1-209ENST00000508290 CYP21A2P08686 494 aa23.32■■□□□ 1.32
SFXN1-209ENST00000508290 PTH1RQ03431 593 aa23.32■■□□□ 1.32
SFXN1-209ENST00000508290 PRPF38BQ5VTL8 546 aaKnown RBP23.32■■□□□ 1.32
SFXN1-209ENST00000508290 RALYLQ86SE5 291 aaKnown RBP23.32■■□□□ 1.32
SFXN1-209ENST00000508290 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
SFXN1-209ENST00000508290 ESYT1Q9BSJ8 1104 aa23.32■■□□□ 1.32
SFXN1-209ENST00000508290 TNKSO95271 1327 aa23.32■■□□□ 1.32
SFXN1-209ENST00000508290 ZNF543Q08ER8 600 aa23.31■■□□□ 1.32
SFXN1-209ENST00000508290 ZNF792Q3KQV3 632 aa23.31■■□□□ 1.32
SFXN1-209ENST00000508290 SYDE2Q5VT97 1194 aa23.31■■□□□ 1.32
SFXN1-209ENST00000508290 ZNF467Q7Z7K2 595 aaPredicted RBP23.31■■□□□ 1.32
SFXN1-209ENST00000508290 ENAHQ8N8S7 591 aaPredicted RBP23.31■■□□□ 1.32
SFXN1-209ENST00000508290 RANBP17Q9H2T7 1088 aaKnown RBP23.31■■□□□ 1.32
SFXN1-209ENST00000508290 ACAD9Q9H845 621 aa23.31■■□□□ 1.32
SFXN1-209ENST00000508290 RIPK3Q9Y572 518 aa23.31■■□□□ 1.32
SFXN1-209ENST00000508290 ICAM1P05362 532 aa23.3■■□□□ 1.32
SFXN1-209ENST00000508290 CYP2C19P33261 490 aa23.3■■□□□ 1.32
SFXN1-209ENST00000508290 SART3Q15020 963 aaKnown RBP23.3■■□□□ 1.32
SFXN1-209ENST00000508290 ANKRD35Q8N283 1001 aa23.3■■□□□ 1.32
SFXN1-209ENST00000508290 NCOA7Q8NI08 942 aa23.3■■□□□ 1.32
SFXN1-209ENST00000508290 ZKSCAN3Q9BRR0 538 aa23.3■■□□□ 1.32
SFXN1-209ENST00000508290 MTMR7Q9Y216 660 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms