RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 PCDHA4Q9UN74 947 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.18
PDE6B-212ENST00000496514 DAGLAQ9Y4D2 1042 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
PDE6B-212ENST00000496514 STAT6P42226 847 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 GRM4Q14833 912 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 PPP2R5BQ15173 497 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 MLKLQ8NB16 471 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 TAB2Q9NYJ8 693 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
PDE6B-212ENST00000496514 CBFA2T2O43439 604 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 GSTO1P78417 241 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
PDE6B-212ENST00000496514 SMCO2A6NFE2 343 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 SOWAHDA6NJG2 315 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 STXBP3O00186 592 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 PPEF1O14829 653 aaPredicted RBP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 LDHCP07864 332 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 GTF2F1P35269 517 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 NFIAQ12857 509 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 TTBK2Q6IQ55 1244 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 KIAA0825Q8IV33 1275 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 ZNF18P17022 549 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 ATP2B4P23634 1241 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 RBM5P52756 815 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 SNAP25P60880 206 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 KIF18AQ8NI77 898 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 TRPC5Q9UL62 973 aaPredicted RBP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 TECP42680 631 aa13.94□□□□□ -0.18
PDE6B-212ENST00000496514 ENOX1Q8TC92 643 aaKnown RBP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
PDE6B-212ENST00000496514 UBE2SQ16763 222 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 IQUBQ8NA54 791 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 BAG1Q99933 345 aaPredicted RBP13.93□□□□□ -0.18
PDE6B-212ENST00000496514 LZTFL1Q9NQ48 299 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 URI1O94763 535 aaPredicted RBP13.93□□□□□ -0.18
PDE6B-212ENST00000496514 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
PDE6B-212ENST00000496514 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
PDE6B-212ENST00000496514 RBL2Q08999 1139 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 E2F4Q16254 413 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 CRY2Q49AN0 593 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 DTHD1Q6ZMT9 781 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 KCTD1Q719H9 257 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
PDE6B-212ENST00000496514 ZSWIM4Q9H7M6 989 aa13.93□□□□□ -0.18
PDE6B-212ENST00000496514 TXKP42681 527 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 SPECC1LQ69YQ0 1117 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 PDXDC2PQ6P474 469 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 C4orf32Q8N8J7 132 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 CCDC88AQ3V6T2 1871 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 TFRCP02786 760 aaKnown RBP13.92□□□□□ -0.18
PDE6B-212ENST00000496514 UBA7P41226 1012 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 ERCC6LQ2NKX8 1250 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 COL23A1Q86Y22 540 aaPredicted RBP13.92□□□□□ -0.18
PDE6B-212ENST00000496514 IGSF22Q8N9C0 903 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 RNF225M0QZC1 329 aaPredicted RBP13.92□□□□□ -0.18
PDE6B-212ENST00000496514 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDE6B-212ENST00000496514 NRDCO43847 1150 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 PRCPP42785 496 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 PPP4CP60510 307 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 KANK3Q6NY19 840 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 TMEM139Q8IV31 216 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 NELFBQ8WX92 580 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 DACH1Q9UI36 760 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 PAXBP1Q9Y5B6 917 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 SNED1Q8TER0 1413 aa13.92□□□□□ -0.18
PDE6B-212ENST00000496514 PALM3A6NDB9 673 aaPredicted RBP13.91□□□□□ -0.18
PDE6B-212ENST00000496514 ABL1P00519 1130 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 MMP10P09238 476 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 CASP14P31944 242 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
PDE6B-212ENST00000496514 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 C16orf86Q6ZW13 317 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 TBCKQ8TEA7 893 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 KIAA1551Q9HCM1 1747 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 SBF2Q86WG5 1849 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
PDE6B-212ENST00000496514 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
PDE6B-212ENST00000496514 RPN1P04843 607 aaKnown RBP13.91□□□□□ -0.18
PDE6B-212ENST00000496514 CALML3P27482 149 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 CCDC178Q5BJE1 867 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 ZSCAN29Q8IWY8 852 aaPredicted RBP13.91□□□□□ -0.18
PDE6B-212ENST00000496514 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
PDE6B-212ENST00000496514 WDR24Q96S15 920 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms