RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 IL17RBQ9NRM6 502 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
UFD1-210ENST00000494054 ZMYND8Q9ULU4 1186 aaPredicted RBP11.59□□□□□ -0.55
UFD1-210ENST00000494054 MYH4Q9Y623 1939 aa11.58□□□□□ -0.55
UFD1-210ENST00000494054 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 FGRP09769 529 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 HSPD1P10809 573 aaKnown RBP11.58□□□□□ -0.56
UFD1-210ENST00000494054 BMP3P12645 472 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 LRRC26Q2I0M4 334 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 ZNF792Q3KQV3 632 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 SNRNP48Q6IEG0 339 aaKnown RBP11.58□□□□□ -0.56
UFD1-210ENST00000494054 TEX13BQ9BXU2 312 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 SLC38A10Q9HBR0 1119 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 RAVER2Q9HCJ3 691 aaKnown RBP11.58□□□□□ -0.56
UFD1-210ENST00000494054 SLC5A4Q9NY91 659 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 FEM1BQ9UK73 627 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 SYNPO2Q9UMS6 1093 aa11.58□□□□□ -0.56
UFD1-210ENST00000494054 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
UFD1-210ENST00000494054 TSPY2A6NKD2 308 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 ATP2A1O14983 1001 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 SEPT4O43236 478 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 ORC4O43929 436 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 RANBP6O60518 1105 aaKnown RBP11.57□□□□□ -0.56
UFD1-210ENST00000494054 MSCO60682 206 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 ZBED4O75132 1171 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
UFD1-210ENST00000494054 SYN1P17600 705 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 SDSP20132 328 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 MCCP23508 829 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 COPB2P35606 906 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 GJC2Q5T442 439 aaPredicted RBP11.57□□□□□ -0.56
UFD1-210ENST00000494054 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 TICAM2Q86XR7 235 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 TINF2Q9BSI4 451 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 FRMPD3Q5JV73 1810 aa11.57□□□□□ -0.56
UFD1-210ENST00000494054 NOVP48745 357 aa11.56□□□□□ -0.56
UFD1-210ENST00000494054 HAND2P61296 217 aa11.56□□□□□ -0.56
UFD1-210ENST00000494054 GMCL1Q96IK5 515 aa11.56□□□□□ -0.56
UFD1-210ENST00000494054 SENP6Q9GZR1 1112 aaPredicted RBP11.56□□□□□ -0.56
UFD1-210ENST00000494054 DIS3Q9Y2L1 958 aaKnown RBP11.56□□□□□ -0.56
UFD1-210ENST00000494054 CCDC171Q6TFL3 1326 aa11.56□□□□□ -0.56
UFD1-210ENST00000494054 DNAJC25-GNG10A0A024R161 153 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 DNM1LO00429 736 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 ZNF865P0CJ78 1059 aaPredicted RBP11.55□□□□□ -0.56
UFD1-210ENST00000494054 SLC1A4P43007 532 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
UFD1-210ENST00000494054 IRX6P78412 446 aaPredicted RBP11.55□□□□□ -0.56
UFD1-210ENST00000494054 RRP12Q5JTH9 1297 aaKnown RBP11.55□□□□□ -0.56
UFD1-210ENST00000494054 RCSD1Q6JBY9 416 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 KCTD1Q719H9 257 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 STAG1Q8WVM7 1258 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 DDX11Q96FC9 970 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 GDF15Q99988 308 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 TOMM22Q9NS69 142 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
UFD1-210ENST00000494054 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 CTDP1Q9Y5B0 961 aaPredicted RBP11.55□□□□□ -0.56
UFD1-210ENST00000494054 ZNF536O15090 1300 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 ZMYM6O95789 1325 aa11.55□□□□□ -0.56
UFD1-210ENST00000494054 SNAI1O95863 264 aaPredicted RBP11.54□□□□□ -0.56
UFD1-210ENST00000494054 MYCNP04198 464 aaPredicted RBP11.54□□□□□ -0.56
UFD1-210ENST00000494054 PDE4AP27815 886 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 STAT2P52630 851 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 OAZ1P54368 228 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 SNAP25P60880 206 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
UFD1-210ENST00000494054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
UFD1-210ENST00000494054 FAM160B2Q86V87 743 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 CHURC1Q8WUH1 139 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 FGD4Q96M96 766 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 NRBP1Q9UHY1 535 aa11.54□□□□□ -0.56
UFD1-210ENST00000494054 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 PLA2G6O60733 806 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
UFD1-210ENST00000494054 IKQ13123 557 aaPredicted RBP11.53□□□□□ -0.56
UFD1-210ENST00000494054 LRRC41Q15345 812 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 CHST13Q8NET6 341 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 LENG1Q96BZ8 264 aaPredicted RBP11.53□□□□□ -0.56
UFD1-210ENST00000494054 HOMER2Q9NSB8 354 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
UFD1-210ENST00000494054 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.56
UFD1-210ENST00000494054 A0A1W2PPC1 479 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 KBTBD13C9JR72 458 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 SOX1O00570 391 aaPredicted RBP11.52□□□□□ -0.57
UFD1-210ENST00000494054 PGK1P00558 417 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 FDX1P10109 184 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms