RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 TAF11Q15544 211 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 TAF1CQ15572 869 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 GFOD2Q3B7J2 385 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF9Q3BBW0 867 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 LARP1BQ659C4 914 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 TRAF7Q6Q0C0 670 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 TTC6Q86TZ1 520 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 FBXL16Q8N461 479 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 UBR7Q8N806 425 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 NECAB1Q8N987 351 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 SMARCC2Q8TAQ2 1214 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 NKX2-3Q8TAU0 364 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 FBF1Q8TES7 1133 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 FBXO41Q8TF61 875 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 JARID2Q92833 1246 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 GTF3C6Q969F1 213 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 COL26A1Q96A83 441 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 ANAPC16Q96DE5 110 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 NEK1Q96PY6 1258 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 LLPHQ9BRT6 129 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 C2orf49Q9BVC5 232 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 TEX13AQ9BXU3 409 aaPredicted RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 AGXT2Q9BYV1 514 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 CAAP1Q9H8G2 361 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 ST7Q9NRC1 585 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 AASDHPPTQ9NRN7 309 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 PAG1Q9NWQ8 432 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 ABCF2Q9UG63 623 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 PRKAG3Q9UGI9 489 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 SYNPO2Q9UMS6 1093 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 ZKSCAN5Q9Y2L8 839 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 PCDHB9Q9Y5E1 797 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 GJA3Q9Y6H8 435 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 TAF6LQ9Y6J9 622 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 ABCC12Q96J65 1359 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 PAPPAQ13219 1627 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 AK9Q5TCS8 1911 aa4.34□□□□□ -1.71
ATPAF1-206ENST00000492233 UBR2Q8IWV8 1755 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 ARFGEF2Q9Y6D5 1785 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 CDHR2Q9BYE9 1310 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 A0A1B0GUL7 405 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 VPS37CA5D8V6 355 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 PABPN1LA6NDY0 278 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 PDPK1O15530 556 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 RNF113AO15541 343 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 KATNA1O75449 491 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 CSF1RP07333 972 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 ZFYP08048 801 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 IFIT1P09914 478 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 STAT3P40763 770 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 GCGRP47871 477 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 NEK2P51955 445 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 GPSM2P81274 684 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 PURAQ00577 322 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 APOBRQ0VD83 1088 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 RESTQ13127 1097 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 BIRC3Q13489 604 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 SEPT2Q15019 361 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 LRRFIP1Q32MZ4 808 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 LRRC24Q50LG9 513 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 C2orf27AQ580R0 203 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 OXLD1Q5BKU9 147 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 C6orf132Q5T0Z8 1188 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 GJC2Q5T442 439 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 WWC2Q6AWC2 1192 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 TTLL5Q6EMB2 1281 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 PPP4R3AQ6IN85 833 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 NAA16Q6N069 864 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 CCDC129Q6ZRS4 1044 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 RBM43Q6ZSC3 357 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 Q6ZUG5 572 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 STOX1Q6ZVD7 989 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 CDC37L1Q7L3B6 337 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 DHX32Q7L7V1 743 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 ILDR1Q86SU0 546 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 DGKHQ86XP1 1220 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 TCEAL8Q8IYN2 117 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 KIAA1958Q8N8K9 716 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 RNF214Q8ND24 703 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 DDX54Q8TDD1 881 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 CCDC47Q96A33 483 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 CHMP4CQ96CF2 233 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 TCEANC2Q96MN5 208 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 SEC62Q99442 399 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 SMAD5Q99717 465 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 SCAND2PQ9GZW5 306 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 ZSCAN16Q9H4T2 348 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 GINM1Q9NU53 330 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 PCDH10Q9P2E7 1040 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 STRIP2Q9ULQ0 834 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 PLAAQ9Y263 795 aa4.33□□□□□ -1.72
ATPAF1-206ENST00000492233 NUP188Q5SRE5 1749 aa4.32□□□□□ -1.72
ATPAF1-206ENST00000492233 DISP2A7MBM2 1401 aa4.32□□□□□ -1.72
ATPAF1-206ENST00000492233 MAST3O60307 1309 aa4.32□□□□□ -1.72
ATPAF1-206ENST00000492233 MAP3K15Q6ZN16 1313 aa4.32□□□□□ -1.72
ATPAF1-206ENST00000492233 SALL1Q9NSC2 1324 aa4.32□□□□□ -1.72
ATPAF1-206ENST00000492233 hCG_1984214I3L0E3 225 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms