RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TROAPQ12815 778 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 DLK2Q6UY11 383 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 C11orf57Q6ZUT1 292 aaPredicted RBP15.64■□□□□ 0.09
COPS7B-221ENST00000488111 PNMA1Q8ND90 353 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 MTMR4Q9NYA4 1195 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 TFIP11Q9UBB9 837 aaKnown RBP15.64■□□□□ 0.09
COPS7B-221ENST00000488111 COL2A1P02458 1487 aaPredicted RBP15.64■□□□□ 0.09
COPS7B-221ENST00000488111 NT5C2P49902 561 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 FOSBP53539 338 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 RTN1Q16799 776 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 ERCC6LQ2NKX8 1250 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 NBPF12Q5TAG4 269 aaPredicted RBP15.64■□□□□ 0.09
COPS7B-221ENST00000488111 RASGRP2Q7LDG7 609 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 BICD2Q8TD16 824 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 PHKBQ93100 1093 aa15.64■□□□□ 0.09
COPS7B-221ENST00000488111 HERC5Q9UII4 1024 aaKnown RBP15.64■□□□□ 0.09
COPS7B-221ENST00000488111 DHX16O60231 1041 aaKnown RBP15.63■□□□□ 0.09
COPS7B-221ENST00000488111 ZRANB2O95218 330 aaKnown RBP eCLIP15.63■□□□□ 0.09
COPS7B-221ENST00000488111 RAD51AP2Q09MP3 1159 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 STX1AQ16623 288 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 ABCB5Q2M3G0 1257 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 CCDC178Q5BJE1 867 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 SMARCC2Q8TAQ2 1214 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 ANKS1AQ92625 1134 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 CCDC17Q96LX7 622 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 LLPHQ9BRT6 129 aaKnown RBP15.63■□□□□ 0.09
COPS7B-221ENST00000488111 IGKV6D-41A0A0C4DH26 115 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 GH2P01242 217 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 GSDMDP57764 484 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 SEPT2Q15019 361 aa15.63■□□□□ 0.09
COPS7B-221ENST00000488111 LRRC47Q8N1G4 583 aaKnown RBP15.63■□□□□ 0.09
COPS7B-221ENST00000488111 UBE2Q2LH0YL09 131 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 FDPSP14324 419 aaKnown RBP15.62■□□□□ 0.09
COPS7B-221ENST00000488111 SNW1Q13573 536 aaKnown RBP15.62■□□□□ 0.09
COPS7B-221ENST00000488111 APOBEC3FQ8IUX4 373 aaKnown RBP15.62■□□□□ 0.09
COPS7B-221ENST00000488111 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
COPS7B-221ENST00000488111 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.62■□□□□ 0.09
COPS7B-221ENST00000488111 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 CTAGE5O15320 804 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 GUCY1A2P33402 732 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 EPHX2P34913 555 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 NTRK3Q16288 839 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 FILIP1Q7Z7B0 1213 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
COPS7B-221ENST00000488111 DDAH1O94760 285 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 PLEKHA8P1O95397 391 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 TUBB4AP04350 444 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 KCNJ6P48051 423 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 DHX40Q8IX18 779 aaKnown RBP15.61■□□□□ 0.09
COPS7B-221ENST00000488111 LRRN4CLQ8ND94 238 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.61■□□□□ 0.09
COPS7B-221ENST00000488111 TBC1D12O60347 775 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 TTLL1O95922 423 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 TOP1P11387 765 aaKnown RBP15.61■□□□□ 0.09
COPS7B-221ENST00000488111 NOVP48745 357 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 TEX35Q5T0J7 233 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 E4F1Q66K89 784 aaPredicted RBP15.61■□□□□ 0.09
COPS7B-221ENST00000488111 TXLNBQ8N3L3 684 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 UBXN6Q9BZV1 441 aa15.61■□□□□ 0.09
COPS7B-221ENST00000488111 ORC3Q9UBD5 711 aaPredicted RBP15.61■□□□□ 0.09
COPS7B-221ENST00000488111 ZC3H4Q9UPT8 1303 aaKnown RBP15.6■□□□□ 0.09
COPS7B-221ENST00000488111 POTECB2RU33 542 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 GOLGA8HP0CJ92 632 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CALM1P0DP23 149 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CALM2P0DP24 149 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CALM3P0DP25 149 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 EEF2P13639 858 aaKnown RBP15.6■□□□□ 0.09
COPS7B-221ENST00000488111 TPM4P67936 248 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 RESTQ13127 1097 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 EAPPQ56P03 285 aaPredicted RBP15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CPLX2Q6PUV4 134 aaKnown RBP15.6■□□□□ 0.09
COPS7B-221ENST00000488111 TMEM179Q6ZVK1 233 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CTCFLQ8NI51 663 aaPredicted RBP15.6■□□□□ 0.09
COPS7B-221ENST00000488111 PPP1R13BQ96KQ4 1090 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 SLC26A6Q9BXS9 759 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CABP5Q9NP86 173 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 IMPACTQ9P2X3 320 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 RAD21O60216 631 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 ARHGAP29Q52LW3 1261 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 SIAH1Q8IUQ4 282 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 DCPSQ96C86 337 aaKnown RBP15.6■□□□□ 0.09
COPS7B-221ENST00000488111 AIFM3Q96NN9 605 aa15.6■□□□□ 0.09
COPS7B-221ENST00000488111 CCDC196A0A1B0GTZ2 297 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 hCG_1642624A0A1W2PR95 340 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 ADM5C9JUS6 153 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 RCAN1P53805 252 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 ICA1Q05084 483 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 USP17L2Q6R6M4 530 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 CCDC84Q86UT8 332 aaPredicted RBP15.59■□□□□ 0.09
COPS7B-221ENST00000488111 TRERF1Q96PN7 1200 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 KANSL2Q9H9L4 492 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 GJB4Q9NTQ9 266 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 NID2Q14112 1375 aa15.59■□□□□ 0.09
COPS7B-221ENST00000488111 MYH8P13535 1937 aa15.58■□□□□ 0.09
COPS7B-221ENST00000488111 USP17L5A8MUK1 530 aa15.58■□□□□ 0.09
COPS7B-221ENST00000488111 BECN2A8MW95 431 aa15.58■□□□□ 0.09
COPS7B-221ENST00000488111 ATP8B1O43520 1251 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms