RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TEX13BQ9BXU2 312 aa29.19■■■□□ 2.26
LIME1-206ENST00000487026 ZBED4O75132 1171 aa29.18■■■□□ 2.26
LIME1-206ENST00000487026 TAL1P17542 331 aaPredicted RBP29.18■■■□□ 2.26
LIME1-206ENST00000487026 COPB2P35606 906 aa29.18■■■□□ 2.26
LIME1-206ENST00000487026 SLFN13Q68D06 897 aa29.18■■■□□ 2.26
LIME1-206ENST00000487026 TINF2Q9BSI4 451 aa29.18■■■□□ 2.26
LIME1-206ENST00000487026 RAVER2Q9HCJ3 691 aaKnown RBP29.18■■■□□ 2.26
LIME1-206ENST00000487026 CTDP1Q9Y5B0 961 aaPredicted RBP29.18■■■□□ 2.26
LIME1-206ENST00000487026 GMCL1P1Q8NEA9 526 aa29.17■■■□□ 2.26
LIME1-206ENST00000487026 LRCH3Q96II8 777 aa29.17■■■□□ 2.26
LIME1-206ENST00000487026 FEM1BQ9UK73 627 aa29.17■■■□□ 2.26
LIME1-206ENST00000487026 TACC3Q9Y6A5 838 aa29.17■■■□□ 2.26
LIME1-206ENST00000487026 LNPKQ9C0E8 428 aa29.16■■■□□ 2.26
LIME1-206ENST00000487026 ISY1Q9ULR0 285 aaKnown RBP29.16■■■□□ 2.26
LIME1-206ENST00000487026 DIS3Q9Y2L1 958 aaKnown RBP29.16■■■□□ 2.26
LIME1-206ENST00000487026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.16■■■□□ 2.26
LIME1-206ENST00000487026 LAMA3Q16787 3333 aa29.16■■■□□ 2.26
LIME1-206ENST00000487026 PLIN4Q96Q06 1357 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 KBTBD13C9JR72 458 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 BMP3P12645 472 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 MDM2Q00987 491 aaPredicted RBP29.15■■■□□ 2.26
LIME1-206ENST00000487026 B4GALNT3Q6L9W6 998 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 DDX11Q96FC9 970 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 FAM227BQ96M60 508 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 UBE2OQ9C0C9 1292 aaKnown RBP29.15■■■□□ 2.26
LIME1-206ENST00000487026 SLC38A10Q9HBR0 1119 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 HELLSQ9NRZ9 838 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 SYNPO2Q9UMS6 1093 aa29.15■■■□□ 2.26
LIME1-206ENST00000487026 TMEM232C9JQI7 657 aa29.14■■■□□ 2.26
LIME1-206ENST00000487026 NMT2O60551 498 aa29.14■■■□□ 2.26
LIME1-206ENST00000487026 LRRC41Q15345 812 aa29.14■■■□□ 2.26
LIME1-206ENST00000487026 SMCHD1A6NHR9 2005 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 PLXNA1Q9UIW2 1896 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 A0A0D9SFI3 127 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 ATP2A1O14983 1001 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 ADCYAP1R1P41586 468 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 RTP1P59025 263 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 FERMT2Q96AC1 680 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 IL17RBQ9NRM6 502 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 STX8Q9UNK0 236 aa29.13■■■□□ 2.25
LIME1-206ENST00000487026 TSPY2A6NKD2 308 aa29.12■■■□□ 2.25
LIME1-206ENST00000487026 ZNF865P0CJ78 1059 aaPredicted RBP29.12■■■□□ 2.25
LIME1-206ENST00000487026 MCCP23508 829 aa29.12■■■□□ 2.25
LIME1-206ENST00000487026 SLC39A5Q6ZMH5 540 aa29.12■■■□□ 2.25
LIME1-206ENST00000487026 NRBP1Q9UHY1 535 aa29.12■■■□□ 2.25
LIME1-206ENST00000487026 ATP11BQ9Y2G3 1177 aa29.12■■■□□ 2.25
LIME1-206ENST00000487026 TRIM6-TRIM34B2RNG4 842 aa29.11■■■□□ 2.25
LIME1-206ENST00000487026 RANBP6O60518 1105 aaKnown RBP29.11■■■□□ 2.25
LIME1-206ENST00000487026 RWDD1Q9H446 243 aaPredicted RBP29.11■■■□□ 2.25
LIME1-206ENST00000487026 XPNPEP3Q9NQH7 507 aa29.11■■■□□ 2.25
LIME1-206ENST00000487026 DNAJC25-GNG10A0A024R161 153 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 IGHDP01880 384 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 RARBP10826 455 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 SLC1A4P43007 532 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 NMIQ13287 307 aaPredicted RBP29.1■■■□□ 2.25
LIME1-206ENST00000487026 MCMDC2Q4G0Z9 681 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 TDHQ8IZJ6 230 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 LENG1Q96BZ8 264 aaPredicted RBP29.1■■■□□ 2.25
LIME1-206ENST00000487026 ANAPC4Q9UJX5 808 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 CNPY2Q9Y2B0 182 aa29.1■■■□□ 2.25
LIME1-206ENST00000487026 PGK1P00558 417 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 FGAP02671 866 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 IKQ13123 557 aaPredicted RBP29.09■■■□□ 2.25
LIME1-206ENST00000487026 ALX1Q15699 326 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 KCTD1Q719H9 257 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 SMC5Q8IY18 1101 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 ANKRD35Q8N283 1001 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 EXOC6Q8TAG9 804 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 RILPL2Q969X0 211 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 GMCL1Q96IK5 515 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 HOMER2Q9NSB8 354 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 MTMR7Q9Y216 660 aa29.09■■■□□ 2.25
LIME1-206ENST00000487026 SNAI1O95863 264 aaPredicted RBP29.08■■■□□ 2.25
LIME1-206ENST00000487026 STAT2P52630 851 aa29.08■■■□□ 2.25
LIME1-206ENST00000487026 AAMPQ13685 434 aa29.08■■■□□ 2.25
LIME1-206ENST00000487026 RASGRP2Q7LDG7 609 aa29.08■■■□□ 2.25
LIME1-206ENST00000487026 ZNF589Q86UQ0 364 aaPredicted RBP29.08■■■□□ 2.25
LIME1-206ENST00000487026 SNAP25P60880 206 aa29.07■■■□□ 2.24
LIME1-206ENST00000487026 CHURC1Q8WUH1 139 aa29.07■■■□□ 2.24
LIME1-206ENST00000487026 STAG1Q8WVM7 1258 aa29.07■■■□□ 2.24
LIME1-206ENST00000487026 AGBL1Q96MI9 1066 aa29.07■■■□□ 2.24
LIME1-206ENST00000487026 TOMM22Q9NS69 142 aa29.07■■■□□ 2.24
LIME1-206ENST00000487026 HSPD1P10809 573 aaKnown RBP29.06■■■□□ 2.24
LIME1-206ENST00000487026 AKR1A1P14550 325 aa29.06■■■□□ 2.24
LIME1-206ENST00000487026 OAZ1P54368 228 aa29.06■■■□□ 2.24
LIME1-206ENST00000487026 TRIM60Q495X7 471 aa29.06■■■□□ 2.24
LIME1-206ENST00000487026 RRP12Q5JTH9 1297 aaKnown RBP29.06■■■□□ 2.24
LIME1-206ENST00000487026 CHST13Q8NET6 341 aa29.06■■■□□ 2.24
LIME1-206ENST00000487026 LBHD1Q9BQE6 289 aaPredicted RBP29.06■■■□□ 2.24
LIME1-206ENST00000487026 PRKAG2Q9UGJ0 569 aa29.06■■■□□ 2.24
LIME1-206ENST00000487026 FBXO40Q9UH90 709 aa29.06■■■□□ 2.24
LIME1-206ENST00000487026 SYNGAP1Q96PV0 1343 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 ORC4O43929 436 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 FGRP09769 529 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 PPP4R3BQ5MIZ7 849 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 RCSD1Q6JBY9 416 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 MAMDC4Q6UXC1 1216 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 FAM160B2Q86V87 743 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 CHD1LQ86WJ1 897 aa29.05■■■□□ 2.24
LIME1-206ENST00000487026 MSL3Q8N5Y2 521 aaKnown RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms