RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OAZ1P54368 228 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 UBXN2AP68543 259 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 PLS1Q14651 629 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 SAMD1Q6SPF0 538 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-225ENST00000483506 BTNL9Q6UXG8 535 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 RASGRP2Q7LDG7 609 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 ENAHQ8N8S7 591 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-225ENST00000483506 KIFC2Q96AC6 838 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 ZKSCAN3Q9BRR0 538 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 TEX13BQ9BXU2 312 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 CWC22Q9HCG8 908 aaKnown RBP21.17■□□□□ 0.98
HDAC6-225ENST00000483506 TAF6LQ9Y6J9 622 aa21.17■□□□□ 0.98
HDAC6-225ENST00000483506 TNKSO95271 1327 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 E7EWF7 191 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 HMGCRP04035 888 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 INHAP05111 366 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 PDHBP11177 359 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 TRDNQ13061 729 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 NECTIN1Q15223 517 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 WDR78Q5VTH9 848 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 STOX1Q6ZVD7 989 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC6-225ENST00000483506 TRIB2Q92519 343 aa21.16■□□□□ 0.98
HDAC6-225ENST00000483506 ZBED4O75132 1171 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 CYP2B6P20813 491 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 MTFR1Q15390 333 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 SEC23AQ15436 765 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 CYB5R4Q7L1T6 521 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 NCAPG2Q86XI2 1143 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 TMEM106CQ9BVX2 250 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 ANO2Q9NQ90 1003 aa21.15■□□□□ 0.98
HDAC6-225ENST00000483506 POTEFA5A3E0 1075 aa21.14■□□□□ 0.97
HDAC6-225ENST00000483506 IGHA2P01877 340 aa21.14■□□□□ 0.97
HDAC6-225ENST00000483506 MAP3K21Q5TCX8 1036 aa21.14■□□□□ 0.97
HDAC6-225ENST00000483506 NCOA7Q8NI08 942 aa21.14■□□□□ 0.97
HDAC6-225ENST00000483506 UBAC1Q9BSL1 405 aa21.14■□□□□ 0.97
HDAC6-225ENST00000483506 BIN2Q9UBW5 565 aaPredicted RBP21.14■□□□□ 0.97
HDAC6-225ENST00000483506 ZNFX1Q9P2E3 1918 aaKnown RBP21.14■□□□□ 0.97
HDAC6-225ENST00000483506 CCL5P13501 91 aa21.13■□□□□ 0.97
HDAC6-225ENST00000483506 ADORA2AP29274 412 aa21.13■□□□□ 0.97
HDAC6-225ENST00000483506 ZNF543Q08ER8 600 aa21.13■□□□□ 0.97
HDAC6-225ENST00000483506 CCDC96Q2M329 555 aa21.13■□□□□ 0.97
HDAC6-225ENST00000483506 SNRNP48Q6IEG0 339 aaKnown RBP21.13■□□□□ 0.97
HDAC6-225ENST00000483506 MB21D2Q8IYB1 491 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-225ENST00000483506 PNMA1Q8ND90 353 aa21.13■□□□□ 0.97
HDAC6-225ENST00000483506 PRR12Q9ULL5 1215 aa21.13■□□□□ 0.97
HDAC6-225ENST00000483506 ZNF536O15090 1300 aa21.12■□□□□ 0.97
HDAC6-225ENST00000483506 SLC27A2O14975 620 aa21.12■□□□□ 0.97
HDAC6-225ENST00000483506 FCER1AP12319 257 aa21.12■□□□□ 0.97
HDAC6-225ENST00000483506 ZKSCAN1P17029 563 aaPredicted RBP21.12■□□□□ 0.97
HDAC6-225ENST00000483506 GPATCH4Q5T3I0 446 aaKnown RBP21.12■□□□□ 0.97
HDAC6-225ENST00000483506 CREB3L3Q68CJ9 461 aa21.12■□□□□ 0.97
HDAC6-225ENST00000483506 RALYLQ86SE5 291 aaKnown RBP21.12■□□□□ 0.97
HDAC6-225ENST00000483506 KAT14Q9H8E8 782 aa21.12■□□□□ 0.97
HDAC6-225ENST00000483506 PAK6Q9NQU5 681 aaPredicted RBP21.12■□□□□ 0.97
HDAC6-225ENST00000483506 RIPK3Q9Y572 518 aa21.12■□□□□ 0.97
HDAC6-225ENST00000483506 GJB1P08034 283 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 IKQ13123 557 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-225ENST00000483506 CCL14Q16627 93 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 OLFML2BQ68BL8 750 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 TTBK2Q6IQ55 1244 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 NPLOC4Q8TAT6 608 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 MTA3Q9BTC8 594 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 UNC93B1Q9H1C4 597 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 RANBP17Q9H2T7 1088 aaKnown RBP21.11■□□□□ 0.97
HDAC6-225ENST00000483506 RAVER2Q9HCJ3 691 aaKnown RBP21.11■□□□□ 0.97
HDAC6-225ENST00000483506 ISY1Q9ULR0 285 aaKnown RBP21.11■□□□□ 0.97
HDAC6-225ENST00000483506 MTMR7Q9Y216 660 aa21.11■□□□□ 0.97
HDAC6-225ENST00000483506 CTDP1Q9Y5B0 961 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-225ENST00000483506 COBLO75128 1261 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 CAPN2P17655 700 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 ANTXR2P58335 489 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 TRIM32Q13049 653 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 IFIT1BQ5T764 474 aaKnown RBP21.1■□□□□ 0.97
HDAC6-225ENST00000483506 SYDE2Q5VT97 1194 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 CPXCR1Q8N123 301 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 CHST13Q8NET6 341 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 MMP19Q99542 508 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 RNF208Q9H0X6 261 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 FLRT1Q9NZU1 646 aa21.1■□□□□ 0.97
HDAC6-225ENST00000483506 FRMPD2Q68DX3 1309 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-225ENST00000483506 RPTORQ8N122 1335 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 MYCP01106 439 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-225ENST00000483506 GJA8P48165 433 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 KCTD2Q14681 263 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 DPP9Q86TI2 863 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 SLC5A4Q9NY91 659 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 FBXO40Q9UH90 709 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 DIS3Q9Y2L1 958 aaKnown RBP21.09■□□□□ 0.97
HDAC6-225ENST00000483506 PLXNA1Q9UIW2 1896 aa21.09■□□□□ 0.97
HDAC6-225ENST00000483506 PRKAR2AP13861 404 aaKnown RBP21.08■□□□□ 0.97
HDAC6-225ENST00000483506 EN2P19622 333 aaPredicted RBP21.08■□□□□ 0.97
HDAC6-225ENST00000483506 SLC16A2P36021 539 aa21.08■□□□□ 0.97
HDAC6-225ENST00000483506 SART3Q15020 963 aaKnown RBP21.08■□□□□ 0.97
HDAC6-225ENST00000483506 TKFCQ3LXA3 575 aa21.08■□□□□ 0.97
HDAC6-225ENST00000483506 TSGA10IPQ3SY00 556 aa21.08■□□□□ 0.97
HDAC6-225ENST00000483506 ASPRV1Q53RT3 343 aa21.08■□□□□ 0.97
HDAC6-225ENST00000483506 RNF20Q5VTR2 975 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms