RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 SYNPOQ8N3V7 929 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 SHKBP1Q8TBC3 707 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 BRF1Q92994 677 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 MRGPRX3Q96LB0 322 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 EPN3Q9H201 632 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 SEMA6CQ9H3T2 930 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 PICK1Q9NRD5 415 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 PLAAQ9Y263 795 aa5.06□□□□□ -1.6
CLCC1-209ENST00000482889 WASHC2CQ9Y4E1 1318 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 TRAV20A0A0B4J274 112 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 ANKRD34BA5PLL1 514 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 KIAA1324LA8MWY0 1029 aaPredicted RBP5.05□□□□□ -1.6
CLCC1-209ENST00000482889 HYAL3O43820 417 aaPredicted RBP5.05□□□□□ -1.6
CLCC1-209ENST00000482889 DLX3O60479 287 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 COBLO75128 1261 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 EYA4O95677 639 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 TGFB1P01137 390 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 PABPC1P11940 636 aaKnown RBP5.05□□□□□ -1.6
CLCC1-209ENST00000482889 CNGA1P29973 690 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 YARSP54577 528 aaKnown RBP5.05□□□□□ -1.6
CLCC1-209ENST00000482889 NFKB2Q00653 900 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 CNNM4Q6P4Q7 775 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 ZAR1Q86SH2 424 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 FERMT3Q86UX7 667 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 FMNL3Q8IVF7 1028 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 ADCY4Q8NFM4 1077 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 CHAC2Q8WUX2 184 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 JDP2Q8WYK2 163 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 GATA6Q92908 595 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 SCLYQ96I15 445 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 MFSD14AQ96MC6 490 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 CDC6Q99741 560 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 AARSD1Q9BTE6 412 aaKnown RBP5.05□□□□□ -1.6
CLCC1-209ENST00000482889 METTL22Q9BUU2 404 aaPredicted RBP5.05□□□□□ -1.6
CLCC1-209ENST00000482889 MTFR1LQ9H019 292 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 CAAP1Q9H8G2 361 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 TRIM39Q9HCM9 518 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 HOMER2Q9NSB8 354 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 FAN1Q9Y2M0 1017 aa5.05□□□□□ -1.6
CLCC1-209ENST00000482889 IQCA1LA6NCM1 817 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 WDR64B1ANS9 1081 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 RNGTTO60942 597 aaKnown RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 LRRN2O75325 713 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 CLEC3AO75596 197 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 MAP4K4O95819 1239 aaPredicted RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 S100BP04271 92 aaPredicted RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 F13BP05160 661 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 NFICP08651 508 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 RAB6AP20340 208 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 CD247P20963 164 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 GRIK1P39086 918 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 CAP2P40123 477 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 SNW1Q13573 536 aaKnown RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 NTRK3Q16288 839 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 FNDC3BQ53EP0 1204 aaKnown RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 HEATR6Q6AI08 1181 aaKnown RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 CDH24Q86UP0 819 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 SCUBE1Q8IWY4 988 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 CCDC144CPQ8IYA2 1237 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 AFAP1L2Q8N4X5 818 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 DNAJB8Q8NHS0 232 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 CYB5D2Q8WUJ1 264 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 TSR2Q969E8 191 aaKnown RBP5.04□□□□□ -1.6
CLCC1-209ENST00000482889 PPP1R14AQ96A00 147 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 DHRS1Q96LJ7 313 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 PIDD1Q9HB75 910 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 LGR6Q9HBX8 967 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 ATG3Q9NT62 314 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 MINPP1Q9UNW1 487 aa5.04□□□□□ -1.6
CLCC1-209ENST00000482889 ARNTLO00327 626 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 DYNC1LI2O43237 492 aaPredicted RBP5.03□□□□□ -1.6
CLCC1-209ENST00000482889 FGFR1P11362 822 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 ZNF445P59923 1031 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 CYP27A1Q02318 531 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 HSP90AA2PQ14568 343 aaPredicted RBP5.03□□□□□ -1.6
CLCC1-209ENST00000482889 ZNF460Q14592 562 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 DENND5AQ6IQ26 1287 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 NSMFQ6X4W1 530 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 ADAT2Q7Z6V5 191 aaKnown RBP5.03□□□□□ -1.6
CLCC1-209ENST00000482889 LRRTM3Q86VH5 581 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 BTN2A2Q8WVV5 523 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 DDX1Q92499 740 aaKnown RBP5.03□□□□□ -1.6
CLCC1-209ENST00000482889 TBC1D32Q96NH3 1257 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 OSBPL1AQ9BXW6 950 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 FOXQ1Q9C009 403 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 SLC52A2Q9HAB3 445 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 GP6Q9HCN6 339 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 C1GALT1Q9NS00 363 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 TYW1Q9NV66 732 aaKnown RBP5.03□□□□□ -1.6
CLCC1-209ENST00000482889 PIM2Q9P1W9 311 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 LRP2BPQ9P2M1 347 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 GABBR1Q9UBS5 961 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 ASXL2Q76L83 1435 aa5.03□□□□□ -1.6
CLCC1-209ENST00000482889 CCDC163A0A0D9SF12 145 aa5.02□□□□□ -1.61
CLCC1-209ENST00000482889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.02□□□□□ -1.61
CLCC1-209ENST00000482889 VAMP4O75379 141 aa5.02□□□□□ -1.61
CLCC1-209ENST00000482889 KATNA1O75449 491 aa5.02□□□□□ -1.61
CLCC1-209ENST00000482889 SPINK2P20155 84 aa5.02□□□□□ -1.61
CLCC1-209ENST00000482889 ADMP35318 185 aa5.02□□□□□ -1.61
CLCC1-209ENST00000482889 ZNF143P52747 638 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms