RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PLXNA1Q9UIW2 1896 aa22.44■■□□□ 1.18
ABCF3-214ENST00000480562 MYH4Q9Y623 1939 aa22.44■■□□□ 1.18
ABCF3-214ENST00000480562 ZBED4O75132 1171 aa22.43■■□□□ 1.18
ABCF3-214ENST00000480562 TSPY3P0CV98 308 aa22.43■■□□□ 1.18
ABCF3-214ENST00000480562 TSPY8P0CW00 308 aa22.43■■□□□ 1.18
ABCF3-214ENST00000480562 RARBP10826 455 aa22.43■■□□□ 1.18
ABCF3-214ENST00000480562 DEFB123Q8N688 67 aa22.43■■□□□ 1.18
ABCF3-214ENST00000480562 RAVER2Q9HCJ3 691 aaKnown RBP22.43■■□□□ 1.18
ABCF3-214ENST00000480562 XPNPEP3Q9NQH7 507 aa22.43■■□□□ 1.18
ABCF3-214ENST00000480562 CTDP1Q9Y5B0 961 aaPredicted RBP22.43■■□□□ 1.18
ABCF3-214ENST00000480562 TTLL1O95922 423 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 ZNF865P0CJ78 1059 aaPredicted RBP22.42■■□□□ 1.18
ABCF3-214ENST00000480562 PDE4BQ07343 736 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 PPARAQ07869 468 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 TRIM60Q495X7 471 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 GPR153Q6NV75 609 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 CCDC129Q6ZRS4 1044 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 NEDD1Q8NHV4 660 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 LENG1Q96BZ8 264 aaPredicted RBP22.42■■□□□ 1.18
ABCF3-214ENST00000480562 DDX11Q96FC9 970 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 CRBNQ96SW2 442 aa22.42■■□□□ 1.18
ABCF3-214ENST00000480562 PRDM5Q9NQX1 630 aaPredicted RBP22.42■■□□□ 1.18
ABCF3-214ENST00000480562 SALL3Q9BXA9 1300 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 PGK1P00558 417 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 SLC3A2P08195 630 aaKnown RBP22.41■■□□□ 1.18
ABCF3-214ENST00000480562 TFAP4Q01664 338 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 SLFN13Q68D06 897 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 CHMP4CQ96CF2 233 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 FEM1BQ9UK73 627 aa22.41■■□□□ 1.18
ABCF3-214ENST00000480562 PLIN4Q96Q06 1357 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 ATP2A1O14983 1001 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 SNX17Q15036 470 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 GMCL1P1Q8NEA9 526 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 SLC38A10Q9HBR0 1119 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 ISY1Q9ULR0 285 aaKnown RBP22.4■■□□□ 1.18
ABCF3-214ENST00000480562 PHF24Q9UPV7 400 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 CNPY2Q9Y2B0 182 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 COL6A3P12111 3177 aa22.4■■□□□ 1.18
ABCF3-214ENST00000480562 DNAJC25-GNG10A0A024R161 153 aa22.39■■□□□ 1.17
ABCF3-214ENST00000480562 FOXP2O15409 715 aa22.39■■□□□ 1.17
ABCF3-214ENST00000480562 SNAI1O95863 264 aaPredicted RBP22.39■■□□□ 1.17
ABCF3-214ENST00000480562 BMP3P12645 472 aa22.39■■□□□ 1.17
ABCF3-214ENST00000480562 AKR1A1P14550 325 aa22.39■■□□□ 1.17
ABCF3-214ENST00000480562 INCENPQ9NQS7 918 aa22.39■■□□□ 1.17
ABCF3-214ENST00000480562 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
ABCF3-214ENST00000480562 SYNPO2Q9UMS6 1093 aa22.39■■□□□ 1.17
ABCF3-214ENST00000480562 CTDSPL2Q05D32 466 aa22.38■■□□□ 1.17
ABCF3-214ENST00000480562 SH3RF1Q7Z6J0 888 aa22.38■■□□□ 1.17
ABCF3-214ENST00000480562 RNF180Q86T96 592 aa22.38■■□□□ 1.17
ABCF3-214ENST00000480562 PDLIM7Q9NR12 457 aa22.38■■□□□ 1.17
ABCF3-214ENST00000480562 LTBP2Q14767 1821 aa22.38■■□□□ 1.17
ABCF3-214ENST00000480562 TMEM232C9JQI7 657 aa22.37■■□□□ 1.17
ABCF3-214ENST00000480562 TLE2Q04725 743 aa22.37■■□□□ 1.17
ABCF3-214ENST00000480562 VPS53Q5VIR6 699 aa22.37■■□□□ 1.17
ABCF3-214ENST00000480562 ANKRD35Q8N283 1001 aa22.37■■□□□ 1.17
ABCF3-214ENST00000480562 MSL3Q8N5Y2 521 aaKnown RBP22.37■■□□□ 1.17
ABCF3-214ENST00000480562 BADQ92934 168 aa22.37■■□□□ 1.17
ABCF3-214ENST00000480562 HOMER2Q9NSB8 354 aa22.37■■□□□ 1.17
ABCF3-214ENST00000480562 ZHX1Q9UKY1 873 aaPredicted RBP22.37■■□□□ 1.17
ABCF3-214ENST00000480562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.37■■□□□ 1.17
ABCF3-214ENST00000480562 SYNGAP1Q96PV0 1343 aa22.36■■□□□ 1.17
ABCF3-214ENST00000480562 TRIM43BA6NCK2 446 aa22.36■■□□□ 1.17
ABCF3-214ENST00000480562 C1orf53Q5VUE5 145 aa22.36■■□□□ 1.17
ABCF3-214ENST00000480562 MAMDC4Q6UXC1 1216 aa22.36■■□□□ 1.17
ABCF3-214ENST00000480562 TRIM43Q96BQ3 446 aaPredicted RBP22.36■■□□□ 1.17
ABCF3-214ENST00000480562 MTMR10Q9NXD2 777 aa22.36■■□□□ 1.17
ABCF3-214ENST00000480562 TACC3Q9Y6A5 838 aa22.36■■□□□ 1.17
ABCF3-214ENST00000480562 LAMA2P24043 3122 aaKnown RBP22.35■■□□□ 1.17
ABCF3-214ENST00000480562 A0A1W2PQ45 241 aaPredicted RBP22.35■■□□□ 1.17
ABCF3-214ENST00000480562 A0A1W2PQY0 241 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 NMT2O60551 498 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 ADAMTS4O75173 837 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 MCCP23508 829 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 OAZ1P54368 228 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 SLC17A8Q8NDX2 589 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 CHST13Q8NET6 341 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 EVI5LQ96CN4 794 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 FGD4Q96M96 766 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 IL17RBQ9NRM6 502 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 FBXO40Q9UH90 709 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 FAM184BQ9ULE4 1060 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 STX8Q9UNK0 236 aa22.35■■□□□ 1.17
ABCF3-214ENST00000480562 SYNRGQ9UMZ2 1314 aa22.34■■□□□ 1.17
ABCF3-214ENST00000480562 TSPY2A6NKD2 308 aa22.34■■□□□ 1.17
ABCF3-214ENST00000480562 SLC1A4P43007 532 aa22.34■■□□□ 1.17
ABCF3-214ENST00000480562 PDE1AP54750 535 aa22.34■■□□□ 1.17
ABCF3-214ENST00000480562 IKQ13123 557 aaPredicted RBP22.34■■□□□ 1.17
ABCF3-214ENST00000480562 SHHQ15465 462 aa22.34■■□□□ 1.17
ABCF3-214ENST00000480562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
ABCF3-214ENST00000480562 ZNF467Q7Z7K2 595 aaPredicted RBP22.34■■□□□ 1.17
ABCF3-214ENST00000480562 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
ABCF3-214ENST00000480562 STAT2P52630 851 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 ACVR2BQ13705 512 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 C9orf50Q5SZB4 431 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 KCTD1Q719H9 257 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 RASGRP2Q7LDG7 609 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 CHURC1Q8WUH1 139 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 STAG1Q8WVM7 1258 aa22.33■■□□□ 1.17
ABCF3-214ENST00000480562 GMCL1Q96IK5 515 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms