RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 RTF1Q92541 710 aaKnown RBP9.16□□□□□ -0.94
VPS50-211ENST00000474412 CEP41Q9BYV8 373 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 RRP7AQ9Y3A4 280 aaKnown RBP9.16□□□□□ -0.94
VPS50-211ENST00000474412 WDR90Q96KV7 1748 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 COL4A1P02462 1669 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 CAMTA2O94983 1202 aa9.15□□□□□ -0.94
VPS50-211ENST00000474412 MAPK8P45983 427 aa9.15□□□□□ -0.94
VPS50-211ENST00000474412 GSTM4Q03013 218 aa9.15□□□□□ -0.94
VPS50-211ENST00000474412 Q6ZS46 218 aa9.15□□□□□ -0.94
VPS50-211ENST00000474412 ASB16Q96NS5 453 aa9.15□□□□□ -0.94
VPS50-211ENST00000474412 USP26Q9BXU7 913 aa9.15□□□□□ -0.94
VPS50-211ENST00000474412 SOX17Q9H6I2 414 aaPredicted RBP9.15□□□□□ -0.94
VPS50-211ENST00000474412 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.94
VPS50-211ENST00000474412 LRRC37AA6NMS7 1700 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 STARD3NLO95772 234 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 H2AFB2P0C5Z0 115 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 IL6STP40189 918 aaPredicted RBP9.14□□□□□ -0.95
VPS50-211ENST00000474412 CCDC184Q52MB2 194 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 DZIP1LQ8IYY4 767 aaKnown RBP9.14□□□□□ -0.95
VPS50-211ENST00000474412 ZNF526Q8TF50 670 aaPredicted RBP9.14□□□□□ -0.95
VPS50-211ENST00000474412 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 RNF208Q9H0X6 261 aa9.14□□□□□ -0.95
VPS50-211ENST00000474412 ABCC12Q96J65 1359 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
VPS50-211ENST00000474412 GRIN3BO60391 1043 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 SERPINB2P05120 415 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 TGFB2P61812 414 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 ENOX2Q16206 610 aaKnown RBP9.13□□□□□ -0.95
VPS50-211ENST00000474412 PRPF40BQ6NWY9 871 aaKnown RBP9.13□□□□□ -0.95
VPS50-211ENST00000474412 PI16Q6UXB8 463 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 ZNF576Q9H609 170 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 ABCB6Q9NP58 842 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 A0A1B0GUL6 1792 aa9.13□□□□□ -0.95
VPS50-211ENST00000474412 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
VPS50-211ENST00000474412 SNRPA1P09661 255 aaKnown RBP9.12□□□□□ -0.95
VPS50-211ENST00000474412 TMPOP42166 694 aaKnown RBP9.12□□□□□ -0.95
VPS50-211ENST00000474412 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
VPS50-211ENST00000474412 GRM2Q14416 872 aa9.12□□□□□ -0.95
VPS50-211ENST00000474412 TAF7Q15545 349 aaPredicted RBP9.12□□□□□ -0.95
VPS50-211ENST00000474412 ZNF423Q2M1K9 1284 aa9.12□□□□□ -0.95
VPS50-211ENST00000474412 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
VPS50-211ENST00000474412 PRR5LQ6MZQ0 368 aa9.12□□□□□ -0.95
VPS50-211ENST00000474412 SND1Q7KZF4 910 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS50-211ENST00000474412 PPP4R2Q9NY27 417 aa9.12□□□□□ -0.95
VPS50-211ENST00000474412 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
VPS50-211ENST00000474412 LOC100289279A0A1B0GTE1 492 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 TMEM238LA0A1B0GVL6 79 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 SART1O43290 800 aaKnown RBP9.11□□□□□ -0.95
VPS50-211ENST00000474412 ANXA1P04083 346 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 ITPKAP23677 461 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 PRELPP51888 382 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 RIPK4P57078 832 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 FMR1Q06787 632 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS50-211ENST00000474412 HLFQ16534 295 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 FDX2Q6P4F2 183 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 SLC51AQ86UW1 340 aa9.11□□□□□ -0.95
VPS50-211ENST00000474412 UBL7Q96S82 380 aaPredicted RBP9.11□□□□□ -0.95
VPS50-211ENST00000474412 COL4A5P29400 1685 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 A0A087WZG4 1122 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 NEFMP07197 916 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
VPS50-211ENST00000474412 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS50-211ENST00000474412 TTLL7Q6ZT98 887 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
VPS50-211ENST00000474412 TEX13AQ9BXU3 409 aaPredicted RBP9.1□□□□□ -0.95
VPS50-211ENST00000474412 BCO2Q9BYV7 579 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 TSPYL4Q9UJ04 414 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 LTBP1Q14766 1721 aa9.1□□□□□ -0.95
VPS50-211ENST00000474412 MYL6BP14649 208 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 FCGRTP55899 365 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 WDR43Q15061 677 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS50-211ENST00000474412 UVSSAQ2YD98 709 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 DTHD1Q6ZMT9 781 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 PRR23CQ6ZRP0 262 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 LRP10Q7Z4F1 713 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 C2CD5Q86YS7 1000 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 PIM2Q9P1W9 311 aa9.09□□□□□ -0.95
VPS50-211ENST00000474412 ZNF646O15015 1829 aaPredicted RBP9.09□□□□□ -0.95
VPS50-211ENST00000474412 UBN2Q6ZU65 1347 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 LOC100996750A0A140TA64 210 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 B3GALT4O96024 378 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 CYP11A1P05108 521 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 ITGB7P26010 798 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 DALRD3Q5D0E6 543 aaKnown RBP9.08□□□□□ -0.96
VPS50-211ENST00000474412 PRSS36Q5K4E3 855 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 ARHGAP27Q6ZUM4 889 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 CNBD1Q8NA66 436 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 GLIS3Q8NEA6 775 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 FBF1Q8TES7 1133 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 RUNDC1Q96C34 613 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 KRTAP4-6Q9BYQ5 205 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 SCN4AP35499 1836 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 PSME4Q14997 1843 aa9.08□□□□□ -0.96
VPS50-211ENST00000474412 DUOX1Q9NRD9 1551 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms