RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 PRPF38AQ8NAV1 312 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 GMCL1P1Q8NEA9 526 aa17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 TEX13BQ9BXU2 312 aa17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 SLC38A10Q9HBR0 1119 aa17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 ZNF287Q9HBT7 754 aa17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 SLC5A4Q9NY91 659 aa17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-204ENST00000467560 BMP8BP34820 402 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 PDE4BQ07343 736 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 CPXCR1Q8N123 301 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 LENG1Q96BZ8 264 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 TINF2Q9BSI4 451 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 MYH4Q9Y623 1939 aa17.56■□□□□ 0.4
ATPAF2-204ENST00000467560 A0A1W2PPC1 479 aa17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 ATP2A1O14983 1001 aa17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 ZNF865P0CJ78 1059 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 BMP3P12645 472 aa17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 ZNF589Q86UQ0 364 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-204ENST00000467560 LAMA2P24043 3122 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 DNAJC25-GNG10A0A024R161 153 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 ZBED4O75132 1171 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 SLC3A2P08195 630 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 MDM2Q00987 491 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 NMIQ13287 307 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 LRRC41Q15345 812 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 FGD4Q96M96 766 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 HELLSQ9NRZ9 838 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 FEM1BQ9UK73 627 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 DIS3Q9Y2L1 958 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-204ENST00000467560 ZNF536O15090 1300 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 SNAI1O95863 264 aaPredicted RBP17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 FGAP02671 866 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 MCCP23508 829 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 COPB2P35606 906 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 ADCYAP1R1P41586 468 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 RTP1P59025 263 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 SNAP25P60880 206 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 ALX1Q15699 326 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 ARRDC4Q8NCT1 418 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 FERMT2Q96AC1 680 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
ATPAF2-204ENST00000467560 PLXNA1Q9UIW2 1896 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 PGK1P00558 417 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 FGRP09769 529 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 NOVP48745 357 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 MCMDC2Q4G0Z9 681 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 SLC39A5Q6ZMH5 540 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 KCTD1Q719H9 257 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 UBE2OQ9C0C9 1292 aaKnown RBP17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 NRBP1Q9UHY1 535 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 STX8Q9UNK0 236 aa17.52■□□□□ 0.4
ATPAF2-204ENST00000467560 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 ORC4O43929 436 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 RANBP6O60518 1105 aaKnown RBP17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 PLEKHM2Q8IWE5 1019 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 AGBL1Q96MI9 1066 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 XPNPEP3Q9NQH7 507 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 ATP11BQ9Y2G3 1177 aa17.51■□□□□ 0.39
ATPAF2-204ENST00000467560 COL6A3P12111 3177 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 KBTBD13C9JR72 458 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 ADCY6O43306 1168 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 SLC1A4P43007 532 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 HAND2P61296 217 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 IRX5P78411 483 aaPredicted RBP17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 NUCB1Q02818 461 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 SNX17Q15036 470 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 MAMDC4Q6UXC1 1216 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 TDHQ8IZJ6 230 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 STAG1Q8WVM7 1258 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 RILPL2Q969X0 211 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 MTMR7Q9Y216 660 aa17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 DDX49Q9Y6V7 483 aaKnown RBP17.5■□□□□ 0.39
ATPAF2-204ENST00000467560 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 ADAMTS4O75173 837 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 RARBP10826 455 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 STAT2P52630 851 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 OAZ1P54368 228 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 CNTN2Q02246 1040 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 PHF24Q9UPV7 400 aa17.49■□□□□ 0.39
ATPAF2-204ENST00000467560 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms