RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 MYH4Q9Y623 1939 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 SMCO2A6NFE2 343 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 RAD21O60216 631 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 RIOX1Q9H6W3 641 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 ZBTB7AO95365 584 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 SNHG28P0DPA3 235 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 BMP6P22004 513 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 PTGS1P23219 599 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 LARGE2Q8N3Y3 721 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 COA7Q96BR5 231 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 PI4KBQ9UBF8 816 aa15.45■□□□□ 0.06
UBE4B-206ENST00000466379 PSMD14O00487 310 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 GDF11O95390 407 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 CASP1P29466 404 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 SLC16A2P36021 539 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 CCDC96Q2M329 555 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 ASPRV1Q53RT3 343 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 SARM1Q6SZW1 724 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 KCTD1Q719H9 257 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 C4orf32Q8N8J7 132 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
UBE4B-206ENST00000466379 MAN1B1Q9UKM7 699 aa15.44■□□□□ 0.06
UBE4B-206ENST00000466379 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
UBE4B-206ENST00000466379 AFMP43652 599 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 NCAPHQ15003 741 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 CERKLQ49MI3 558 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-206ENST00000466379 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 C17orf53Q8N3J3 647 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-206ENST00000466379 TMEM60Q9H2L4 133 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 TMEM260Q9NX78 707 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 CLRN2A0PK11 232 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 ZNF500O60304 480 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-206ENST00000466379 SMARCA1P28370 1054 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 CDC25AP30304 524 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 GALNT17Q6IS24 598 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-206ENST00000466379 CCDC186Q7Z3E2 898 aa15.43■□□□□ 0.06
UBE4B-206ENST00000466379 BIN2Q9UBW5 565 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-206ENST00000466379 HOOK1Q9UJC3 728 aaKnown RBP15.43■□□□□ 0.06
UBE4B-206ENST00000466379 GOLGA6L6A8MZA4 724 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 TCP10L2B9ZVM9 353 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 EEF2P13639 858 aaKnown RBP15.42■□□□□ 0.06
UBE4B-206ENST00000466379 SEPT2Q15019 361 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 CCDC144BQ3MJ40 725 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 JAKMIP3Q5VZ66 844 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 ADGRF4Q8IZF3 695 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 CCDC12Q8WUD4 166 aaPredicted RBP15.42■□□□□ 0.06
UBE4B-206ENST00000466379 STAMQ92783 540 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 SMARCE1Q969G3 411 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 PSMD1Q99460 953 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 JMJD4Q9H9V9 463 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 C6orf50Q9HD87 102 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
UBE4B-206ENST00000466379 PSME4Q14997 1843 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.42■□□□□ 0.06
UBE4B-206ENST00000466379 ELOA2Q8IYF1 753 aaPredicted RBP15.42■□□□□ 0.06
UBE4B-206ENST00000466379 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 CCDC17Q96LX7 622 aa15.42■□□□□ 0.06
UBE4B-206ENST00000466379 LMOD1P29536 600 aaPredicted RBP15.41■□□□□ 0.06
UBE4B-206ENST00000466379 JAG1P78504 1218 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 PAGE5Q96GU1 130 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 USP17L10C9JJH3 530 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 PPP1R11O60927 126 aaPredicted RBP15.41■□□□□ 0.06
UBE4B-206ENST00000466379 GNA11P29992 359 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 RRP1BQ14684 758 aaKnown RBP15.41■□□□□ 0.06
UBE4B-206ENST00000466379 LETM2Q2VYF4 491 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 PYCARDQ9ULZ3 195 aa15.41■□□□□ 0.06
UBE4B-206ENST00000466379 PP2D1A8MPX8 630 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SLFN14P0C7P3 912 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 CDC25BP30305 580 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SARSP49591 514 aaKnown RBP15.4■□□□□ 0.06
UBE4B-206ENST00000466379 LRMPQ12912 555 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 NONOQ15233 471 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBE4B-206ENST00000466379 KANK3Q6NY19 840 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 KRT25Q7Z3Z0 450 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SIAH1Q8IUQ4 282 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 MRFAP1L1Q96HT8 127 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 CSRNP1Q96S65 589 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 HSD3B7Q9H2F3 369 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 CCNT1O60563 726 aaKnown RBP15.4■□□□□ 0.06
UBE4B-206ENST00000466379 ENTPD3O75355 529 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
UBE4B-206ENST00000466379 VIL1P09327 827 aaKnown RBP15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 NT5DC1Q5TFE4 455 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SH3RF1Q7Z6J0 888 aa15.4■□□□□ 0.06
UBE4B-206ENST00000466379 SMC2O95347 1197 aa15.39■□□□□ 0.05
UBE4B-206ENST00000466379 ATP1A3P13637 1013 aa15.39■□□□□ 0.05
UBE4B-206ENST00000466379 ICA1Q05084 483 aa15.39■□□□□ 0.05
UBE4B-206ENST00000466379 MORC3Q14149 939 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms