RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
CD40-203ENST00000461171 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
CD40-203ENST00000461171 PRPF38AQ8NAV1 312 aaKnown RBP11.48□□□□□ -0.57
CD40-203ENST00000461171 EXOC6Q8TAG9 804 aa11.48□□□□□ -0.57
CD40-203ENST00000461171 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
CD40-203ENST00000461171 SLC5A4Q9NY91 659 aa11.48□□□□□ -0.57
CD40-203ENST00000461171 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
CD40-203ENST00000461171 ZMYM6O95789 1325 aa11.48□□□□□ -0.57
CD40-203ENST00000461171 PLXNA1Q9UIW2 1896 aa11.48□□□□□ -0.57
CD40-203ENST00000461171 ZNFX1Q9P2E3 1918 aaKnown RBP11.48□□□□□ -0.57
CD40-203ENST00000461171 A0A1W2PPC1 479 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 DNM1LO00429 736 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 SEPT4O43236 478 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 ORC4O43929 436 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 IGHDP01880 384 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 PGK2P07205 417 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 NOVP48745 357 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 TFAP4Q01664 338 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 NUCB1Q02818 461 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 KCTD2Q14681 263 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 LRRC26Q2I0M4 334 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
CD40-203ENST00000461171 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
CD40-203ENST00000461171 CHD1LQ86WJ1 897 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 PLEKHM2Q8IWE5 1019 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 MMP19Q99542 508 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 GDF15Q99988 308 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 RWDD1Q9H446 243 aaPredicted RBP11.47□□□□□ -0.57
CD40-203ENST00000461171 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 SLC38A10Q9HBR0 1119 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 IL17RBQ9NRM6 502 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 NRBP1Q9UHY1 535 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 RIPK3Q9Y572 518 aa11.47□□□□□ -0.57
CD40-203ENST00000461171 DNAJC25-GNG10A0A024R161 153 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 CNGA1P29973 690 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 OAZ1P54368 228 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 NMIQ13287 307 aaPredicted RBP11.46□□□□□ -0.57
CD40-203ENST00000461171 MCMDC2Q4G0Z9 681 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 TINF2Q9BSI4 451 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 INCENPQ9NQS7 918 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 FEM1BQ9UK73 627 aa11.46□□□□□ -0.57
CD40-203ENST00000461171 ZMYND8Q9ULU4 1186 aaPredicted RBP11.46□□□□□ -0.57
CD40-203ENST00000461171 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 NMT2O60551 498 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 FGAP02671 866 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
CD40-203ENST00000461171 BMP3P12645 472 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 BMP8BP34820 402 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 PRAMEF19Q5SWL8 479 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 B4GALNT3Q6L9W6 998 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 FGD4Q96M96 766 aa11.45□□□□□ -0.58
CD40-203ENST00000461171 ZNF536O15090 1300 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 SMCHD1A6NHR9 2005 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 PLA2G6O60733 806 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 ZBED4O75132 1171 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 ZNF865P0CJ78 1059 aaPredicted RBP11.44□□□□□ -0.58
CD40-203ENST00000461171 FDX1P10109 184 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
CD40-203ENST00000461171 STAT2P52630 851 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 SNX17Q15036 470 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 ANO1Q5XXA6 986 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 MAMDC4Q6UXC1 1216 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 RASGRP2Q7LDG7 609 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 CPXCR1Q8N123 301 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 MSL3Q8N5Y2 521 aaKnown RBP11.44□□□□□ -0.58
CD40-203ENST00000461171 ARRDC4Q8NCT1 418 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 KIFC2Q96AC6 838 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 RAVER2Q9HCJ3 691 aaKnown RBP11.44□□□□□ -0.58
CD40-203ENST00000461171 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 LAMA4Q16363 1823 aa11.44□□□□□ -0.58
CD40-203ENST00000461171 SYNGAP1Q96PV0 1343 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 TMEM232C9JQI7 657 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 RANBP6O60518 1105 aaKnown RBP11.43□□□□□ -0.58
CD40-203ENST00000461171 SYN1P17600 705 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 SDSP20132 328 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 MCCP23508 829 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 SLC1A4P43007 532 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 MAGEA10P43363 369 aaPredicted RBP11.43□□□□□ -0.58
CD40-203ENST00000461171 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
CD40-203ENST00000461171 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
CD40-203ENST00000461171 FAM160B2Q86V87 743 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 TBC1D10CQ8IV04 446 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 CHST13Q8NET6 341 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 STAG1Q8WVM7 1258 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
CD40-203ENST00000461171 FBXO40Q9UH90 709 aa11.43□□□□□ -0.58
CD40-203ENST00000461171 SOX1O00570 391 aaPredicted RBP11.42□□□□□ -0.58
CD40-203ENST00000461171 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
CD40-203ENST00000461171 PCP11498 1178 aaKnown RBP11.42□□□□□ -0.58
CD40-203ENST00000461171 LRRC41Q15345 812 aa11.42□□□□□ -0.58
CD40-203ENST00000461171 RCSD1Q6JBY9 416 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms