RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 HMMRO75330 724 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 AKR1A1P14550 325 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 FAAP100Q0VG06 881 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 KCTD2Q14681 263 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 SBK1Q52WX2 424 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
LMCD1-206ENST00000456506 RNF180Q86T96 592 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 MYLIPQ8WY64 445 aa14.3□□□□□ -0.12
LMCD1-206ENST00000456506 STRBPQ96SI9 672 aaKnown RBP14.3□□□□□ -0.12
LMCD1-206ENST00000456506 NUP88Q99567 741 aaPredicted RBP14.3□□□□□ -0.12
LMCD1-206ENST00000456506 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
LMCD1-206ENST00000456506 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 NDUFB10O96000 172 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 COPB2P35606 906 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 ACLYP53396 1101 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
LMCD1-206ENST00000456506 MSL3Q8N5Y2 521 aaKnown RBP14.29□□□□□ -0.12
LMCD1-206ENST00000456506 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
LMCD1-206ENST00000456506 TOX2Q96NM4 488 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 TSEN34Q9BSV6 310 aaKnown RBP14.29□□□□□ -0.12
LMCD1-206ENST00000456506 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 NYAP2Q9P242 653 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 SYNGAP1Q96PV0 1343 aa14.29□□□□□ -0.12
LMCD1-206ENST00000456506 TMEM265A0A087WTH1 108 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 F5H6K3 240 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 MS4A1P11836 297 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 KLRC3Q07444 240 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 ZNF467Q7Z7K2 595 aaPredicted RBP14.28□□□□□ -0.12
LMCD1-206ENST00000456506 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 KATNBL1Q9H079 304 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
LMCD1-206ENST00000456506 CHD7Q9P2D1 2997 aa14.28□□□□□ -0.12
LMCD1-206ENST00000456506 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
LMCD1-206ENST00000456506 MOXD2PA6NHM9 499 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 CTAGE5O15320 804 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
LMCD1-206ENST00000456506 PQBP1O60828 265 aaKnown RBP14.27□□□□□ -0.13
LMCD1-206ENST00000456506 CST5P28325 142 aaPredicted RBP14.27□□□□□ -0.13
LMCD1-206ENST00000456506 CDK7P50613 346 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
LMCD1-206ENST00000456506 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 OSBP2Q969R2 916 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 MKL1Q969V6 931 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 UPF3AQ9H1J1 476 aaKnown RBP14.27□□□□□ -0.13
LMCD1-206ENST00000456506 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.13
LMCD1-206ENST00000456506 TRANK1O15050 2925 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 DUSP11O75319 330 aaKnown RBP14.26□□□□□ -0.13
LMCD1-206ENST00000456506 RAG1P15918 1043 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 NKX3-2P78367 333 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 FPGSQ05932 587 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 PRPF38AQ8NAV1 312 aaKnown RBP14.26□□□□□ -0.13
LMCD1-206ENST00000456506 RNPC3Q96LT9 517 aaKnown RBP14.26□□□□□ -0.13
LMCD1-206ENST00000456506 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
LMCD1-206ENST00000456506 TIMP1P01033 207 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 GRIN2CQ14957 1233 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 KCNA10Q16322 511 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.25□□□□□ -0.13
LMCD1-206ENST00000456506 LRRCC1Q9C099 1032 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 STARD7Q9NQZ5 370 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 TMEM39AQ9NV64 488 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 CNPY2Q9Y2B0 182 aa14.25□□□□□ -0.13
LMCD1-206ENST00000456506 ELP1O95163 1332 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 FOSL2P15408 326 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 GJA9P57773 515 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 C20orf194Q5TEA3 1177 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 APPBP2Q92624 585 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 ECHDC1Q9NTX5 307 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.24□□□□□ -0.13
LMCD1-206ENST00000456506 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
LMCD1-206ENST00000456506 MYO9BQ13459 2157 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 ASTN1O14525 1302 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 ZNF536O15090 1300 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 XIRP2A4UGR9 3374 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 MINDY4BA8MYZ0 360 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 M0R2C6 588 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 GPAA1O43292 621 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 RAD21O60216 631 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 ASGR1P07306 291 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 DNAJB2P25686 324 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 MFSD5Q6N075 450 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 FAM126BQ8IXS8 530 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 CPXCR1Q8N123 301 aa14.23□□□□□ -0.13
LMCD1-206ENST00000456506 STK11IPQ8N1F8 1099 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms