RNA–Protein interactions for RNA: ENST00000433909.2

CCDC189-201, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,157 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-201ENST00000433909 SLC39A5Q6ZMH5 540 aa23.22■■□□□ 1.31
CCDC189-201ENST00000433909 CPXCR1Q8N123 301 aa23.22■■□□□ 1.31
CCDC189-201ENST00000433909 LRRC47Q8N1G4 583 aaKnown RBP23.22■■□□□ 1.31
CCDC189-201ENST00000433909 TAL1P17542 331 aaPredicted RBP23.21■■□□□ 1.31
CCDC189-201ENST00000433909 ADCYAP1R1P41586 468 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 NEDD1Q8NHV4 660 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 FERMT2Q96AC1 680 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 CRBNQ96SW2 442 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 XPNPEP3Q9NQH7 507 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 FEM1BQ9UK73 627 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 SYNPO2Q9UMS6 1093 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 RIPK3Q9Y572 518 aa23.21■■□□□ 1.31
CCDC189-201ENST00000433909 ZNFX1Q9P2E3 1918 aaKnown RBP23.2■■□□□ 1.3
CCDC189-201ENST00000433909 PLIN4Q96Q06 1357 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 TFAP4Q01664 338 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 SLFN13Q68D06 897 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 GPR153Q6NV75 609 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 GMCL1P1Q8NEA9 526 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 DDX11Q96FC9 970 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 RAVER2Q9HCJ3 691 aaKnown RBP23.2■■□□□ 1.3
CCDC189-201ENST00000433909 CNPY2Q9Y2B0 182 aa23.2■■□□□ 1.3
CCDC189-201ENST00000433909 SALL3Q9BXA9 1300 aa23.19■■□□□ 1.3
CCDC189-201ENST00000433909 ATP2A1O14983 1001 aa23.19■■□□□ 1.3
CCDC189-201ENST00000433909 CCDC129Q6ZRS4 1044 aa23.19■■□□□ 1.3
CCDC189-201ENST00000433909 SLC38A10Q9HBR0 1119 aa23.19■■□□□ 1.3
CCDC189-201ENST00000433909 ISY1Q9ULR0 285 aaKnown RBP23.19■■□□□ 1.3
CCDC189-201ENST00000433909 ZNF865P0CJ78 1059 aaPredicted RBP23.18■■□□□ 1.3
CCDC189-201ENST00000433909 AKR1A1P14550 325 aa23.18■■□□□ 1.3
CCDC189-201ENST00000433909 TRIM60Q495X7 471 aa23.18■■□□□ 1.3
CCDC189-201ENST00000433909 RNF180Q86T96 592 aa23.18■■□□□ 1.3
CCDC189-201ENST00000433909 PRDM5Q9NQX1 630 aaPredicted RBP23.18■■□□□ 1.3
CCDC189-201ENST00000433909 PGK1P00558 417 aa23.17■■□□□ 1.3
CCDC189-201ENST00000433909 BMP3P12645 472 aa23.17■■□□□ 1.3
CCDC189-201ENST00000433909 SNX17Q15036 470 aa23.17■■□□□ 1.3
CCDC189-201ENST00000433909 MSL3Q8N5Y2 521 aaKnown RBP23.17■■□□□ 1.3
CCDC189-201ENST00000433909 DEFB123Q8N688 67 aa23.17■■□□□ 1.3
CCDC189-201ENST00000433909 PHF24Q9UPV7 400 aa23.17■■□□□ 1.3
CCDC189-201ENST00000433909 MYH4Q9Y623 1939 aa23.16■■□□□ 1.3
CCDC189-201ENST00000433909 LENG1Q96BZ8 264 aaPredicted RBP23.16■■□□□ 1.3
CCDC189-201ENST00000433909 EVI5LQ96CN4 794 aa23.16■■□□□ 1.3
CCDC189-201ENST00000433909 FBXO40Q9UH90 709 aa23.16■■□□□ 1.3
CCDC189-201ENST00000433909 SMCHD1A6NHR9 2005 aa23.16■■□□□ 1.3
CCDC189-201ENST00000433909 SYNGAP1Q96PV0 1343 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 DNAJC25-GNG10A0A024R161 153 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 TMEM232C9JQI7 657 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 FOXP2O15409 715 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 OAZ1P54368 228 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 CTDSPL2Q05D32 466 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 Q7L0L9 218 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 ANKRD35Q8N283 1001 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 ZHX1Q9UKY1 873 aaPredicted RBP23.15■■□□□ 1.3
CCDC189-201ENST00000433909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCDC189-201ENST00000433909 PLXNA1Q9UIW2 1896 aa23.15■■□□□ 1.3
CCDC189-201ENST00000433909 TSPY2A6NKD2 308 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 SNAI1O95863 264 aaPredicted RBP23.14■■□□□ 1.29
CCDC189-201ENST00000433909 SLC1A4P43007 532 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 STAT2P52630 851 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 IKQ13123 557 aaPredicted RBP23.14■■□□□ 1.29
CCDC189-201ENST00000433909 HDAC1Q13547 482 aaPredicted RBP23.14■■□□□ 1.29
CCDC189-201ENST00000433909 PPP4R3BQ5MIZ7 849 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 C1orf53Q5VUE5 145 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 CHST13Q8NET6 341 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 INCENPQ9NQS7 918 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 PDLIM7Q9NR12 457 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 FAM184BQ9ULE4 1060 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
CCDC189-201ENST00000433909 FDX1P10109 184 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 MCCP23508 829 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 PDE1AP54750 535 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 VPS53Q5VIR6 699 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 MAMDC4Q6UXC1 1216 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.13■■□□□ 1.29
CCDC189-201ENST00000433909 ZNF467Q7Z7K2 595 aaPredicted RBP23.13■■□□□ 1.29
CCDC189-201ENST00000433909 CHURC1Q8WUH1 139 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 GMCL1Q96IK5 515 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 HOMER2Q9NSB8 354 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 COL6A3P12111 3177 aa23.13■■□□□ 1.29
CCDC189-201ENST00000433909 ADAMTS4O75173 837 aa23.12■■□□□ 1.29
CCDC189-201ENST00000433909 TLE2Q04725 743 aa23.12■■□□□ 1.29
CCDC189-201ENST00000433909 FAM160B2Q86V87 743 aa23.12■■□□□ 1.29
CCDC189-201ENST00000433909 STAG1Q8WVM7 1258 aa23.12■■□□□ 1.29
CCDC189-201ENST00000433909 HELLSQ9NRZ9 838 aa23.12■■□□□ 1.29
CCDC189-201ENST00000433909 A0A1W2PQ45 241 aaPredicted RBP23.11■■□□□ 1.29
CCDC189-201ENST00000433909 A0A1W2PQY0 241 aa23.11■■□□□ 1.29
CCDC189-201ENST00000433909 RANBP6O60518 1105 aaKnown RBP23.11■■□□□ 1.29
CCDC189-201ENST00000433909 SH3RF1Q7Z6J0 888 aa23.11■■□□□ 1.29
CCDC189-201ENST00000433909 BADQ92934 168 aa23.11■■□□□ 1.29
CCDC189-201ENST00000433909 IL17RBQ9NRM6 502 aa23.11■■□□□ 1.29
CCDC189-201ENST00000433909 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.11■■□□□ 1.29
CCDC189-201ENST00000433909 SYNRGQ9UMZ2 1314 aa23.1■■□□□ 1.29
CCDC189-201ENST00000433909 TRIM43BA6NCK2 446 aa23.1■■□□□ 1.29
CCDC189-201ENST00000433909 NMT2O60551 498 aa23.1■■□□□ 1.29
CCDC189-201ENST00000433909 ACVR2BQ13705 512 aa23.1■■□□□ 1.29
CCDC189-201ENST00000433909 KCTD1Q719H9 257 aa23.1■■□□□ 1.29
CCDC189-201ENST00000433909 TRIM43Q96BQ3 446 aaPredicted RBP23.1■■□□□ 1.29
CCDC189-201ENST00000433909 FGD4Q96M96 766 aa23.1■■□□□ 1.29
CCDC189-201ENST00000433909 TSEN34Q9BSV6 310 aaKnown RBP23.1■■□□□ 1.29
CCDC189-201ENST00000433909 ACAD9Q9H845 621 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms