RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 ZNFX1Q9P2E3 1918 aaKnown RBP16.58■□□□□ 0.25
SEC13-211ENST00000431352 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 SNX17Q15036 470 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 LRRFIP1Q32MZ4 808 aaKnown RBP16.58■□□□□ 0.24
SEC13-211ENST00000431352 SH3RF1Q7Z6J0 888 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 RNF180Q86T96 592 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 ZNF287Q9HBT7 754 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 NRBP1Q9UHY1 535 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.24
SEC13-211ENST00000431352 COL6A3P12111 3177 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 PQBP1O60828 265 aaKnown RBP16.57■□□□□ 0.24
SEC13-211ENST00000431352 ZBED4O75132 1171 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 ZNF865P0CJ78 1059 aaPredicted RBP16.57■□□□□ 0.24
SEC13-211ENST00000431352 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 AKR1A1P14550 325 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 TLE2Q04725 743 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
SEC13-211ENST00000431352 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 NAPBQ9H115 298 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 PHF24Q9UPV7 400 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 STXBP5LQ9Y2K9 1186 aa16.57■□□□□ 0.24
SEC13-211ENST00000431352 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
SEC13-211ENST00000431352 TTC41PQ6P2S7 1318 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
SEC13-211ENST00000431352 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 TRIM43BA6NCK2 446 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
SEC13-211ENST00000431352 DLL1O00548 723 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 ERC2O15083 957 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 TTLL1O95922 423 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 SHHQ15465 462 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
SEC13-211ENST00000431352 TRIM43Q96BQ3 446 aaPredicted RBP16.56■□□□□ 0.24
SEC13-211ENST00000431352 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 PDE4BQ07343 736 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 PPARAQ07869 468 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 IKQ13123 557 aaPredicted RBP16.55■□□□□ 0.24
SEC13-211ENST00000431352 SLFN13Q68D06 897 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 FEM1BQ9UK73 627 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
SEC13-211ENST00000431352 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 SNAI1O95863 264 aaPredicted RBP16.54■□□□□ 0.24
SEC13-211ENST00000431352 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
SEC13-211ENST00000431352 CLTBP09497 229 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 BMP3P12645 472 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 MX1P20591 662 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 TFAP4Q01664 338 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 GUCD1Q96NT3 240 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 SLC38A10Q9HBR0 1119 aa16.54■□□□□ 0.24
SEC13-211ENST00000431352 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 DNAJC25-GNG10A0A024R161 153 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 MYADML2A6NDP7 307 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 TMEM232C9JQI7 657 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 ADAMTS4O75173 837 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 ITGB8P26012 769 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 ZNF697Q5TEC3 545 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 GMCL1P1Q8NEA9 526 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 MKL1Q969V6 931 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 STARD7Q9NQZ5 370 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 FAM184BQ9ULE4 1060 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 MTMR7Q9Y216 660 aa16.53■□□□□ 0.24
SEC13-211ENST00000431352 ATP2A1O14983 1001 aa16.52■□□□□ 0.24
SEC13-211ENST00000431352 ACLYP53396 1101 aa16.52■□□□□ 0.24
SEC13-211ENST00000431352 IRX5P78411 483 aaPredicted RBP16.52■□□□□ 0.24
SEC13-211ENST00000431352 CTDSPL2Q05D32 466 aa16.52■□□□□ 0.24
SEC13-211ENST00000431352 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.24
SEC13-211ENST00000431352 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
SEC13-211ENST00000431352 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.52■□□□□ 0.24
SEC13-211ENST00000431352 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
SEC13-211ENST00000431352 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
SEC13-211ENST00000431352 TSPY2A6NKD2 308 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 POTEB2H3BUK9 544 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 ADCY6O43306 1168 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 NMT2O60551 498 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 C6orf222P0C671 652 aaPredicted RBP16.51■□□□□ 0.23
SEC13-211ENST00000431352 RAG1P15918 1043 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 SLC1A4P43007 532 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 STAT2P52630 851 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 SNAP25P60880 206 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 KCNA10Q16322 511 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 KCTD1Q719H9 257 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 CHST13Q8NET6 341 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 FGD4Q96M96 766 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
SEC13-211ENST00000431352 TMEM39AQ9NV64 488 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms