RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 CPXCR1Q8N123 301 aa22.9■■□□□ 1.26
CPSF7-204ENST00000413232 NEDD1Q8NHV4 660 aa22.9■■□□□ 1.26
CPSF7-204ENST00000413232 LENG1Q96BZ8 264 aaPredicted RBP22.9■■□□□ 1.26
CPSF7-204ENST00000413232 TEX13BQ9BXU2 312 aa22.9■■□□□ 1.26
CPSF7-204ENST00000413232 ATP11BQ9Y2G3 1177 aa22.9■■□□□ 1.26
CPSF7-204ENST00000413232 PLIN4Q96Q06 1357 aa22.89■■□□□ 1.26
CPSF7-204ENST00000413232 DNAJC25-GNG10A0A024R161 153 aa22.89■■□□□ 1.25
CPSF7-204ENST00000413232 KBTBD13C9JR72 458 aa22.89■■□□□ 1.25
CPSF7-204ENST00000413232 SLC4A3P48751 1232 aa22.89■■□□□ 1.25
CPSF7-204ENST00000413232 LRRFIP1Q32MZ4 808 aaKnown RBP22.89■■□□□ 1.25
CPSF7-204ENST00000413232 ANKRD45Q5TZF3 282 aa22.89■■□□□ 1.25
CPSF7-204ENST00000413232 KIFC2Q96AC6 838 aa22.89■■□□□ 1.25
CPSF7-204ENST00000413232 NAPBQ9H115 298 aa22.89■■□□□ 1.25
CPSF7-204ENST00000413232 RAVER2Q9HCJ3 691 aaKnown RBP22.89■■□□□ 1.25
CPSF7-204ENST00000413232 ATP2A1O14983 1001 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 TTLL1O95922 423 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 PGK1P00558 417 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 TFAP4Q01664 338 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 SNX17Q15036 470 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 TRIM60Q495X7 471 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 CHMP4CQ96CF2 233 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 NACAP1Q9BZK3 213 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 SLC38A10Q9HBR0 1119 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 ZNF287Q9HBT7 754 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 NRBP1Q9UHY1 535 aa22.88■■□□□ 1.25
CPSF7-204ENST00000413232 SNAI1O95863 264 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-204ENST00000413232 TSPY3P0CV98 308 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 TSPY8P0CW00 308 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 COPB2P35606 906 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 CTDSPL2Q05D32 466 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 VPS53Q5VIR6 699 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 SLFN13Q68D06 897 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 GMCL1P1Q8NEA9 526 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 FGD4Q96M96 766 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 XPNPEP3Q9NQH7 507 aa22.87■■□□□ 1.25
CPSF7-204ENST00000413232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.87■■□□□ 1.25
CPSF7-204ENST00000413232 RARBP10826 455 aa22.86■■□□□ 1.25
CPSF7-204ENST00000413232 PDE4BQ07343 736 aa22.86■■□□□ 1.25
CPSF7-204ENST00000413232 GPR153Q6NV75 609 aa22.86■■□□□ 1.25
CPSF7-204ENST00000413232 SH3RF1Q7Z6J0 888 aa22.86■■□□□ 1.25
CPSF7-204ENST00000413232 IL17RBQ9NRM6 502 aa22.86■■□□□ 1.25
CPSF7-204ENST00000413232 FEM1BQ9UK73 627 aa22.86■■□□□ 1.25
CPSF7-204ENST00000413232 NMT2O60551 498 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 ZBED4O75132 1171 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 RASGRP2Q7LDG7 609 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 DEFB123Q8N688 67 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 DDX11Q96FC9 970 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 LBHD1Q9BQE6 289 aaPredicted RBP22.85■■□□□ 1.25
CPSF7-204ENST00000413232 SYNPO2Q9UMS6 1093 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 PHF24Q9UPV7 400 aa22.85■■□□□ 1.25
CPSF7-204ENST00000413232 BMP3P12645 472 aa22.84■■□□□ 1.25
CPSF7-204ENST00000413232 PDE1AP54750 535 aa22.84■■□□□ 1.25
CPSF7-204ENST00000413232 IRX5P78411 483 aaPredicted RBP22.84■■□□□ 1.25
CPSF7-204ENST00000413232 MAMDC4Q6UXC1 1216 aa22.84■■□□□ 1.25
CPSF7-204ENST00000413232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.84■■□□□ 1.25
CPSF7-204ENST00000413232 A0A0C4DFX4 3053 aa22.83■■□□□ 1.25
CPSF7-204ENST00000413232 TRIM43BA6NCK2 446 aa22.83■■□□□ 1.25
CPSF7-204ENST00000413232 TMEM232C9JQI7 657 aa22.83■■□□□ 1.25
CPSF7-204ENST00000413232 ADAMTS4O75173 837 aa22.83■■□□□ 1.25
CPSF7-204ENST00000413232 AKR1A1P14550 325 aa22.83■■□□□ 1.25
CPSF7-204ENST00000413232 TRIM43Q96BQ3 446 aaPredicted RBP22.83■■□□□ 1.25
CPSF7-204ENST00000413232 PRDM5Q9NQX1 630 aaPredicted RBP22.83■■□□□ 1.25
CPSF7-204ENST00000413232 PDLIM7Q9NR12 457 aa22.83■■□□□ 1.25
CPSF7-204ENST00000413232 ZNF536O15090 1300 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 ADCY6O43306 1168 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 SLC3A2P08195 630 aaKnown RBP22.82■■□□□ 1.24
CPSF7-204ENST00000413232 MCCP23508 829 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 ITGB8P26012 769 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 TLE2Q04725 743 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 HDAC1Q13547 482 aaPredicted RBP22.82■■□□□ 1.24
CPSF7-204ENST00000413232 C1orf53Q5VUE5 145 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 EVI5LQ96CN4 794 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 FAM227BQ96M60 508 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 MTMR10Q9NXD2 777 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 PRKAG2Q9UGJ0 569 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 CNPY2Q9Y2B0 182 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 SYNGAP1Q96PV0 1343 aa22.82■■□□□ 1.24
CPSF7-204ENST00000413232 LCTP09848 1927 aa22.81■■□□□ 1.24
CPSF7-204ENST00000413232 RNF180Q86T96 592 aa22.81■■□□□ 1.24
CPSF7-204ENST00000413232 MSL3Q8N5Y2 521 aaKnown RBP22.81■■□□□ 1.24
CPSF7-204ENST00000413232 BADQ92934 168 aa22.81■■□□□ 1.24
CPSF7-204ENST00000413232 AGBL1Q96MI9 1066 aa22.81■■□□□ 1.24
CPSF7-204ENST00000413232 HOMER2Q9NSB8 354 aa22.81■■□□□ 1.24
CPSF7-204ENST00000413232 CTDP1Q9Y5B0 961 aaPredicted RBP22.81■■□□□ 1.24
CPSF7-204ENST00000413232 A0A0D9SFI3 127 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 A0A1W2PQ45 241 aaPredicted RBP22.8■■□□□ 1.24
CPSF7-204ENST00000413232 A0A1W2PQY0 241 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 MYADML2A6NDP7 307 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 OAZ1P54368 228 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 SNAP25P60880 206 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 CNTN2Q02246 1040 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 SHHQ15465 462 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 C9orf50Q5SZB4 431 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 KCTD1Q719H9 257 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 ZNF467Q7Z7K2 595 aaPredicted RBP22.8■■□□□ 1.24
CPSF7-204ENST00000413232 ANKRD35Q8N283 1001 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 KLHDC9Q8NEP7 349 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 CHST13Q8NET6 341 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 GMCL1Q96IK5 515 aa22.8■■□□□ 1.24
CPSF7-204ENST00000413232 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms