RNA–Protein interactions for RNA: ENST00000398225.7

PDE9A-208, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-208ENST00000398225 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
PDE9A-208ENST00000398225 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
PDE9A-208ENST00000398225 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
PDE9A-208ENST00000398225 PALM3A6NDB9 673 aaPredicted RBP17.09■□□□□ 0.33
PDE9A-208ENST00000398225 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDE9A-208ENST00000398225 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
PDE9A-208ENST00000398225 POTEEQ6S8J3 1075 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 CTCFLQ8NI51 663 aaPredicted RBP17.09■□□□□ 0.33
PDE9A-208ENST00000398225 SLC35G1Q2M3R5 365 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
PDE9A-208ENST00000398225 ZNF274Q96GC6 653 aaPredicted RBP17.09■□□□□ 0.33
PDE9A-208ENST00000398225 VAT1LQ9HCJ6 419 aa17.09■□□□□ 0.33
PDE9A-208ENST00000398225 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.33
PDE9A-208ENST00000398225 CALM1P0DP23 149 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 CALM2P0DP24 149 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 CALM3P0DP25 149 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 COG2Q14746 738 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.33
PDE9A-208ENST00000398225 RTN1Q16799 776 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 PIBF1Q8WXW3 757 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 ATG4CQ96DT6 458 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 R3HDMLQ9H3Y0 253 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 CHMP5Q9NZZ3 219 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 FEM1BQ9UK73 627 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.33
PDE9A-208ENST00000398225 CYTH3O43739 400 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 OSBPP22059 807 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 MCM4P33991 863 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 HERVK_113P62684 666 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 SCRN1Q12765 414 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDE9A-208ENST00000398225 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.32
PDE9A-208ENST00000398225 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 PRR12Q9ULL5 1215 aa17.08■□□□□ 0.32
PDE9A-208ENST00000398225 TRPA1O75762 1119 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 DSG3P32926 999 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 KIF5BP33176 963 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 OTUD7BQ6GQQ9 843 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
PDE9A-208ENST00000398225 MAP3K14Q99558 947 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 SLC45A1Q9Y2W3 748 aa17.07■□□□□ 0.32
PDE9A-208ENST00000398225 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
PDE9A-208ENST00000398225 CRHR2Q13324 411 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 PRPF38AQ8NAV1 312 aaKnown RBP17.06■□□□□ 0.32
PDE9A-208ENST00000398225 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 RNF186Q9NXI6 227 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 ST3GAL1Q11201 340 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 HOXC10Q9NYD6 342 aa17.06■□□□□ 0.32
PDE9A-208ENST00000398225 PFKFB2O60825 505 aa17.05■□□□□ 0.32
PDE9A-208ENST00000398225 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
PDE9A-208ENST00000398225 TAL1P17542 331 aaPredicted RBP17.05■□□□□ 0.32
PDE9A-208ENST00000398225 TMTC3Q6ZXV5 915 aa17.05■□□□□ 0.32
PDE9A-208ENST00000398225 FAM160B2Q86V87 743 aa17.05■□□□□ 0.32
PDE9A-208ENST00000398225 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
PDE9A-208ENST00000398225 JMJD4Q9H9V9 463 aa17.05■□□□□ 0.32
PDE9A-208ENST00000398225 BTBD7Q9P203 1132 aa17.05■□□□□ 0.32
PDE9A-208ENST00000398225 CPA4Q9UI42 421 aa17.05■□□□□ 0.32
PDE9A-208ENST00000398225 GOLGA6L3A6NEY3 463 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 VWA5AO00534 786 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 PLA2G6O60733 806 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 RCAN1P53805 252 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 HOMER1Q86YM7 354 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 CCDC83Q8IWF9 413 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 PHKBQ93100 1093 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 PARK7Q99497 189 aaKnown RBP17.04■□□□□ 0.32
PDE9A-208ENST00000398225 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
PDE9A-208ENST00000398225 RBPJLQ9UBG7 517 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 NID2Q14112 1375 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 CA12O43570 354 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 FUT2Q10981 343 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 NTRK3Q16288 839 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 ZCCHC17Q9NP64 241 aaKnown RBP17.04■□□□□ 0.32
PDE9A-208ENST00000398225 DOCK3Q8IZD9 2030 aa17.04■□□□□ 0.32
PDE9A-208ENST00000398225 ZSWIM8A7E2V4 1837 aa17.03■□□□□ 0.32
PDE9A-208ENST00000398225 PLS1Q14651 629 aa17.03■□□□□ 0.32
PDE9A-208ENST00000398225 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
PDE9A-208ENST00000398225 Q3C1V9 767 aa17.03■□□□□ 0.32
PDE9A-208ENST00000398225 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
PDE9A-208ENST00000398225 PIGSQ96S52 555 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms