RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
TRAV4-201ENST00000390426 DIS3Q9Y2L1 958 aaKnown RBP12.75□□□□□ -0.37
TRAV4-201ENST00000390426 PARP14Q460N5 1801 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 TTLL1O95922 423 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 TFAP4Q01664 338 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 PDE4BQ07343 736 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 PPARAQ07869 468 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 LRIT3Q3SXY7 679 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 NEDD1Q8NHV4 660 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 LBHD1Q9BQE6 289 aaPredicted RBP12.74□□□□□ -0.37
TRAV4-201ENST00000390426 XPNPEP3Q9NQH7 507 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
TRAV4-201ENST00000390426 ISY1Q9ULR0 285 aaKnown RBP12.74□□□□□ -0.37
TRAV4-201ENST00000390426 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
TRAV4-201ENST00000390426 SALL3Q9BXA9 1300 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 RANBP2P49792 3224 aaKnown RBP12.73□□□□□ -0.37
TRAV4-201ENST00000390426 PGK1P00558 417 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
TRAV4-201ENST00000390426 ZNF865P0CJ78 1059 aaPredicted RBP12.73□□□□□ -0.37
TRAV4-201ENST00000390426 RARBP10826 455 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 CTDSPL2Q05D32 466 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 LENG1Q96BZ8 264 aaPredicted RBP12.73□□□□□ -0.37
TRAV4-201ENST00000390426 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 FEM1BQ9UK73 627 aa12.73□□□□□ -0.37
TRAV4-201ENST00000390426 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
TRAV4-201ENST00000390426 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
TRAV4-201ENST00000390426 ATP2A1O14983 1001 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 FOXP2O15409 715 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 BMP3P12645 472 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 Q7L0L9 218 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 SLC38A10Q9HBR0 1119 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
TRAV4-201ENST00000390426 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
TRAV4-201ENST00000390426 DNAJC25-GNG10A0A024R161 153 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 SNAI1O95863 264 aaPredicted RBP12.71□□□□□ -0.37
TRAV4-201ENST00000390426 AKR1A1P14550 325 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.37
TRAV4-201ENST00000390426 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 RNF180Q86T96 592 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 ANKRD35Q8N283 1001 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 EVI5LQ96CN4 794 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
TRAV4-201ENST00000390426 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAV4-201ENST00000390426 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
TRAV4-201ENST00000390426 PLIN4Q96Q06 1357 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 NMT2O60551 498 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 MCCP23508 829 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 PDE1AP54750 535 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 TLE2Q04725 743 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 SNX17Q15036 470 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 BADQ92934 168 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 MTMR7Q9Y216 660 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 SMCHD1A6NHR9 2005 aa12.7□□□□□ -0.38
TRAV4-201ENST00000390426 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
TRAV4-201ENST00000390426 SLC1A4P43007 532 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 SNAP25P60880 206 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
TRAV4-201ENST00000390426 MAMDC4Q6UXC1 1216 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 FAM160B2Q86V87 743 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
TRAV4-201ENST00000390426 CHURC1Q8WUH1 139 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 STAG1Q8WVM7 1258 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
TRAV4-201ENST00000390426 GMCL1Q96IK5 515 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 FGD4Q96M96 766 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
TRAV4-201ENST00000390426 IL17RBQ9NRM6 502 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 HELLSQ9NRZ9 838 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 MTMR10Q9NXD2 777 aa12.69□□□□□ -0.38
TRAV4-201ENST00000390426 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
TRAV4-201ENST00000390426 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
TRAV4-201ENST00000390426 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
TRAV4-201ENST00000390426 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
TRAV4-201ENST00000390426 ADAMTS4O75173 837 aa12.68□□□□□ -0.38
TRAV4-201ENST00000390426 FDX1P10109 184 aa12.68□□□□□ -0.38
TRAV4-201ENST00000390426 STAT2P52630 851 aa12.68□□□□□ -0.38
TRAV4-201ENST00000390426 OAZ1P54368 228 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms