RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TFRCP02786 760 aaKnown RBP26.02■■□□□ 1.76
SRM-201ENST00000376957 HOXC6P09630 235 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 ADORA2AP29274 412 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 OAZ1P54368 228 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 CASC1Q6TDU7 716 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 TBC1D10CQ8IV04 446 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 DCAF4Q8WV16 495 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 PLXNB2O15031 1838 aa26.02■■□□□ 1.76
SRM-201ENST00000376957 NOVP48745 357 aa26.01■■□□□ 1.75
SRM-201ENST00000376957 CCDC96Q2M329 555 aa26.01■■□□□ 1.75
SRM-201ENST00000376957 SNRNP48Q6IEG0 339 aaKnown RBP26.01■■□□□ 1.75
SRM-201ENST00000376957 DGKHQ86XP1 1220 aa26.01■■□□□ 1.75
SRM-201ENST00000376957 DEFB118Q96PH6 123 aa26.01■■□□□ 1.75
SRM-201ENST00000376957 MMP19Q99542 508 aa26.01■■□□□ 1.75
SRM-201ENST00000376957 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.01■■□□□ 1.755e-16■■■■■ 90.1
SRM-201ENST00000376957 ZNF214Q9UL59 606 aaPredicted RBP26.01■■□□□ 1.75
SRM-201ENST00000376957 LAMA4Q16363 1823 aa26■■□□□ 1.75
SRM-201ENST00000376957 ATP2A1O14983 1001 aa26■■□□□ 1.75
SRM-201ENST00000376957 SGSM2O43147 1006 aa26■■□□□ 1.75
SRM-201ENST00000376957 PLA2G6O60733 806 aa26■■□□□ 1.75
SRM-201ENST00000376957 PRKAR2AP13861 404 aaKnown RBP26■■□□□ 1.75
SRM-201ENST00000376957 CPXCR1Q8N123 301 aa26■■□□□ 1.75
SRM-201ENST00000376957 TMEM47Q9BQJ4 181 aa26■■□□□ 1.75
SRM-201ENST00000376957 NBPF3Q9H094 633 aa26■■□□□ 1.75
SRM-201ENST00000376957 PAK6Q9NQU5 681 aaPredicted RBP26■■□□□ 1.75
SRM-201ENST00000376957 FBXO40Q9UH90 709 aa26■■□□□ 1.75
SRM-201ENST00000376957 MTMR7Q9Y216 660 aa26■■□□□ 1.75
SRM-201ENST00000376957 TACC3Q9Y6A5 838 aa26■■□□□ 1.75
SRM-201ENST00000376957 CENPFP49454 3210 aa25.99■■□□□ 1.75
SRM-201ENST00000376957 KDM4AO75164 1064 aa25.99■■□□□ 1.75
SRM-201ENST00000376957 SLC4A3P48751 1232 aa25.99■■□□□ 1.75
SRM-201ENST00000376957 BMP2KLQ5H9B9 411 aa25.99■■□□□ 1.75
SRM-201ENST00000376957 UBAC1Q9BSL1 405 aa25.99■■□□□ 1.75
SRM-201ENST00000376957 SLC38A10Q9HBR0 1119 aa25.99■■□□□ 1.75
SRM-201ENST00000376957 COL11A1P12107 1806 aaPredicted RBP25.99■■□□□ 1.75
SRM-201ENST00000376957 NEDD4P46934 1319 aa25.98■■□□□ 1.75
SRM-201ENST00000376957 OLFML2BQ68BL8 750 aa25.97■■□□□ 1.75
SRM-201ENST00000376957 KCTD1Q719H9 257 aa25.97■■□□□ 1.75
SRM-201ENST00000376957 REPS2Q8NFH8 660 aa25.97■■□□□ 1.75
SRM-201ENST00000376957 DDX11Q96FC9 970 aa25.97■■□□□ 1.75
SRM-201ENST00000376957 KAT14Q9H8E8 782 aa25.97■■□□□ 1.75
SRM-201ENST00000376957 ZNF236Q9UL36 1845 aa25.97■■□□□ 1.75
SRM-201ENST00000376957 B4E1Z4 1266 aa25.96■■□□□ 1.75
SRM-201ENST00000376957 CACNB2Q08289 660 aaPredicted RBP25.96■■□□□ 1.75
SRM-201ENST00000376957 CCL14Q16627 93 aa25.96■■□□□ 1.75
SRM-201ENST00000376957 MAP3K21Q5TCX8 1036 aa25.96■■□□□ 1.75
SRM-201ENST00000376957 RALYLQ86SE5 291 aaKnown RBP25.96■■□□□ 1.75
SRM-201ENST00000376957 CHST13Q8NET6 341 aa25.96■■□□□ 1.75
SRM-201ENST00000376957 ZSCAN10Q96SZ4 725 aaPredicted RBP25.96■■□□□ 1.75
SRM-201ENST00000376957 PNMA2Q9UL42 364 aa25.96■■□□□ 1.75
SRM-201ENST00000376957 MSCO60682 206 aa25.95■■□□□ 1.74
SRM-201ENST00000376957 CHMP4CQ96CF2 233 aa25.95■■□□□ 1.74
SRM-201ENST00000376957 ZKSCAN3Q9BRR0 538 aa25.95■■□□□ 1.74
SRM-201ENST00000376957 IL25Q9H293 177 aa25.95■■□□□ 1.74
SRM-201ENST00000376957 RAVER2Q9HCJ3 691 aaKnown RBP25.95■■□□□ 1.74
SRM-201ENST00000376957 ZSWIM5Q9P217 1185 aa25.95■■□□□ 1.74
SRM-201ENST00000376957 DIS3Q9Y2L1 958 aaKnown RBP25.95■■□□□ 1.74
SRM-201ENST00000376957 TRIM32Q13049 653 aa25.94■■□□□ 1.74
SRM-201ENST00000376957 TKFCQ3LXA3 575 aa25.94■■□□□ 1.74
SRM-201ENST00000376957 GPATCH4Q5T3I0 446 aaKnown RBP25.94■■□□□ 1.74
SRM-201ENST00000376957 ANKLE1Q8NAG6 615 aa25.94■■□□□ 1.74
SRM-201ENST00000376957 NPLOC4Q8TAT6 608 aa25.94■■□□□ 1.74
SRM-201ENST00000376957 HTATIP2Q9BUP3 242 aa25.94■■□□□ 1.74
SRM-201ENST00000376957 ERICH2A1L162 156 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 FARP2O94887 1054 aaPredicted RBP25.93■■□□□ 1.74
SRM-201ENST00000376957 CNGA1P29973 690 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 PTH1RQ03431 593 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 SART3Q15020 963 aaKnown RBP25.93■■□□□ 1.74
SRM-201ENST00000376957 ERICH6BQ5W0A0 696 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 ANKRD35Q8N283 1001 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 MAP4K1Q92918 833 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 PRR12Q9ULL5 1215 aa25.93■■□□□ 1.74
SRM-201ENST00000376957 NCOA7Q8NI08 942 aa25.92■■□□□ 1.74
SRM-201ENST00000376957 SHISA4Q96DD7 197 aa25.92■■□□□ 1.74
SRM-201ENST00000376957 CRISPLD2Q9H0B8 497 aa25.92■■□□□ 1.74
SRM-201ENST00000376957 TNKSO95271 1327 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 COBLO75128 1261 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 PDHBP11177 359 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 IFIT1BQ5T764 474 aaKnown RBP25.91■■□□□ 1.74
SRM-201ENST00000376957 PNMA1Q8ND90 353 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 ANKS1AQ92625 1134 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 MAML3Q96JK9 1138 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 ACAD9Q9H845 621 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 GPCPD1Q9NPB8 672 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 FLRT1Q9NZU1 646 aa25.91■■□□□ 1.74
SRM-201ENST00000376957 CYP21A2P08686 494 aa25.9■■□□□ 1.74
SRM-201ENST00000376957 CYP2C19P33261 490 aa25.9■■□□□ 1.74
SRM-201ENST00000376957 BTNL9Q6UXG8 535 aa25.9■■□□□ 1.74
SRM-201ENST00000376957 ESYT1Q9BSJ8 1104 aa25.9■■□□□ 1.74
SRM-201ENST00000376957 NRBP1Q9UHY1 535 aa25.9■■□□□ 1.74
SRM-201ENST00000376957 ZNFX1Q9P2E3 1918 aaKnown RBP25.9■■□□□ 1.74
SRM-201ENST00000376957 FRMPD2Q68DX3 1309 aaPredicted RBP25.89■■□□□ 1.74
SRM-201ENST00000376957 PGK2P07205 417 aa25.89■■□□□ 1.74
SRM-201ENST00000376957 SYDE2Q5VT97 1194 aa25.89■■□□□ 1.74
SRM-201ENST00000376957 MSL3Q8N5Y2 521 aaKnown RBP25.89■■□□□ 1.74
SRM-201ENST00000376957 HOMER2Q9NSB8 354 aa25.89■■□□□ 1.74
SRM-201ENST00000376957 RIPK3Q9Y572 518 aa25.89■■□□□ 1.74
SRM-201ENST00000376957 CCND3P30281 292 aaPredicted RBP25.88■■□□□ 1.73
SRM-201ENST00000376957 ZNF543Q08ER8 600 aa25.88■■□□□ 1.73
SRM-201ENST00000376957 CCDC174Q6PII3 467 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms