RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 POLR2DO15514 142 aaKnown RBP11.79□□□□□ -0.52
PGK1-201ENST00000373316 ETF1P62495 437 aaKnown RBP11.79□□□□□ -0.52
PGK1-201ENST00000373316 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
PGK1-201ENST00000373316 LIN9Q5TKA1 542 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 C8orf74Q6P047 294 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 LRRC8AQ8IWT6 810 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
PGK1-201ENST00000373316 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
PGK1-201ENST00000373316 LIFRP42702 1097 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 PKP1Q13835 747 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 TAOK1Q7L7X3 1001 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 CNPY4Q8N129 248 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 BCCIPQ9P287 314 aaKnown RBP eCLIP11.78□□□□□ -0.52
PGK1-201ENST00000373316 ATP2B4P23634 1241 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 OTUD6BQ8N6M0 293 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 RABGGTAQ92696 567 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
PGK1-201ENST00000373316 RAB17Q9H0T7 212 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
PGK1-201ENST00000373316 C10orf76Q5T2E6 689 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 ISM2Q6H9L7 571 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 C10orf67Q8IYJ2 551 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 GPT2Q8TD30 523 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 BICD1Q96G01 975 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 BCRP11274 1271 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
PGK1-201ENST00000373316 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
PGK1-201ENST00000373316 PRPF4BQ13523 1007 aaKnown RBP11.78□□□□□ -0.52
PGK1-201ENST00000373316 CCDC14Q49A88 953 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 IFNL3Q8IZI9 196 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 ARMT1Q9H993 441 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 LRWD1Q9UFC0 647 aa11.78□□□□□ -0.52
PGK1-201ENST00000373316 UTP11Q9Y3A2 253 aaKnown RBP11.78□□□□□ -0.52
PGK1-201ENST00000373316 FOSP01100 380 aaPredicted RBP11.77□□□□□ -0.52
PGK1-201ENST00000373316 GCFC2P16383 781 aaKnown RBP11.77□□□□□ -0.52
PGK1-201ENST00000373316 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.52
PGK1-201ENST00000373316 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.52
PGK1-201ENST00000373316 MCM6Q14566 821 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 CABP7Q86V35 215 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 CNBD1Q8NA66 436 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 NELFBQ8WX92 580 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 GPR101Q96P66 508 aaPredicted RBP11.77□□□□□ -0.52
PGK1-201ENST00000373316 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 A0A1W2PRG0 241 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 ZNF174Q15697 407 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 UTP14CQ5TAP6 766 aaKnown RBP11.77□□□□□ -0.52
PGK1-201ENST00000373316 FANCBQ8NB91 859 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 COL15A1P39059 1388 aa11.77□□□□□ -0.52
PGK1-201ENST00000373316 SLC26A4O43511 780 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 ZAP70P43403 619 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
PGK1-201ENST00000373316 SETDB1Q15047 1291 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 TTC31Q49AM3 519 aaPredicted RBP11.77□□□□□ -0.53
PGK1-201ENST00000373316 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
PGK1-201ENST00000373316 IQCGQ9H095 443 aaKnown RBP11.77□□□□□ -0.53
PGK1-201ENST00000373316 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.53
PGK1-201ENST00000373316 TRAF5O00463 557 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 SFMBT2Q5VUG0 894 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
PGK1-201ENST00000373316 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 FAM184BQ9ULE4 1060 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 TAF1P21675 1872 aa11.77□□□□□ -0.53
PGK1-201ENST00000373316 PDE6AP16499 860 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 PIK3AP1Q6ZUJ8 805 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 GABPB2Q8TAK5 448 aaPredicted RBP11.76□□□□□ -0.53
PGK1-201ENST00000373316 VPS18Q9P253 973 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 DAAM1Q9Y4D1 1078 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 COL4A1P02462 1669 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 RUBCNQ92622 972 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 TRPC5Q9UL62 973 aaPredicted RBP11.76□□□□□ -0.53
PGK1-201ENST00000373316 HYOU1Q9Y4L1 999 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.76□□□□□ -0.536e-6■□□□□ 10.8
PGK1-201ENST00000373316 PSMD2Q13200 908 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 RIC8AQ9NPQ8 531 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 HOMER2Q9NSB8 354 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.76□□□□□ -0.539e-7■■□□□ 11.7
PGK1-201ENST00000373316 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 SPATA31A6Q5VVP1 1343 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 KRT9P35527 623 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 KCNJ6P48051 423 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 SH3BGRP55822 239 aaPredicted RBP11.76□□□□□ -0.53
PGK1-201ENST00000373316 NECTIN1Q15223 517 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 525.7 ms