RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 N4BP3O15049 544 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 FGRP09769 529 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 TAL1P17542 331 aaPredicted RBP13.3□□□□□ -0.28
PDE6C-201ENST00000371447 CALML3P27482 149 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 UBE2SQ16763 222 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 ZFPM1Q8IX07 1006 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 CERS5Q8N5B7 392 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 BAG1Q99933 345 aaPredicted RBP13.3□□□□□ -0.28
PDE6C-201ENST00000371447 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
PDE6C-201ENST00000371447 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 ELF2Q15723 593 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 TOGARAM2Q6ZUX3 1019 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 ATRIPQ8WXE1 791 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 MTA3Q9BTC8 594 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 IMPACTQ9P2X3 320 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
PDE6C-201ENST00000371447 PCP11498 1178 aaKnown RBP13.29□□□□□ -0.28
PDE6C-201ENST00000371447 PPFIBP1Q86W92 1011 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
PDE6C-201ENST00000371447 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
PDE6C-201ENST00000371447 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 BBOX1O75936 387 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 CHRNA5P30532 468 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 RHBDL3P58872 404 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 GNG11P61952 73 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 GRM4Q14833 912 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 SPECC1LQ69YQ0 1117 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
PDE6C-201ENST00000371447 EPC1Q9H2F5 836 aa13.29□□□□□ -0.28
PDE6C-201ENST00000371447 RCAN1P53805 252 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
PDE6C-201ENST00000371447 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 DYMQ7RTS9 669 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 NELFBQ8WX92 580 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 GPR75-ASB3A0A0A6YYF3 556 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 STXBP3O00186 592 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 SARSP49591 514 aaKnown RBP13.28□□□□□ -0.28
PDE6C-201ENST00000371447 RBL2Q08999 1139 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
PDE6C-201ENST00000371447 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 FAM237AA0A1B0GTK4 181 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 IDEP14735 1019 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 ENOX1Q8TC92 643 aaKnown RBP13.28□□□□□ -0.28
PDE6C-201ENST00000371447 PAXBP1Q9Y5B6 917 aa13.28□□□□□ -0.28
PDE6C-201ENST00000371447 NRAPQ86VF7 1730 aa13.27□□□□□ -0.28
PDE6C-201ENST00000371447 GNAQP50148 359 aa13.27□□□□□ -0.28
PDE6C-201ENST00000371447 ERCC6LQ2NKX8 1250 aa13.27□□□□□ -0.28
PDE6C-201ENST00000371447 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.28
PDE6C-201ENST00000371447 IRS2Q9Y4H2 1338 aa13.27□□□□□ -0.29
PDE6C-201ENST00000371447 RPN1P04843 607 aaKnown RBP13.27□□□□□ -0.29
PDE6C-201ENST00000371447 CASP14P31944 242 aa13.27□□□□□ -0.29
PDE6C-201ENST00000371447 PRCPP42785 496 aa13.27□□□□□ -0.29
PDE6C-201ENST00000371447 NUP88Q99567 741 aaPredicted RBP13.27□□□□□ -0.29
PDE6C-201ENST00000371447 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
PDE6C-201ENST00000371447 DUOX1Q9NRD9 1551 aa13.27□□□□□ -0.29
PDE6C-201ENST00000371447 GDF11O95390 407 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 ASIC1P78348 528 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 NYAP1Q6ZVC0 841 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 POLD4Q9HCU8 107 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 TCP11L1Q9NUJ3 509 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 SPATA31A6Q5VVP1 1343 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 BMP15O95972 392 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 SPATA1Q5VX52 437 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 C6orf50Q9HD87 102 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 TDP2O95551 362 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 PLCG1P19174 1290 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 PMS1P54277 932 aaKnown RBP13.26□□□□□ -0.29
PDE6C-201ENST00000371447 PPP4CP60510 307 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 NONOQ15233 471 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDE6C-201ENST00000371447 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 FILIP1LQ4L180 1135 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 SPICE1Q8N0Z3 855 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 ZFP91Q96JP5 570 aaPredicted RBP13.26□□□□□ -0.29
PDE6C-201ENST00000371447 TRIM47Q96LD4 638 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
PDE6C-201ENST00000371447 PALM3A6NDB9 673 aaPredicted RBP13.25□□□□□ -0.29
PDE6C-201ENST00000371447 POTEMA6NI47 508 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 C16orf86Q6ZW13 317 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
PDE6C-201ENST00000371447 NEDD1Q8NHV4 660 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 TBC1D7Q9P0N9 293 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 CHD4Q14839 1912 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 PLCG2P16885 1265 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 UBXN1Q04323 297 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 PAK1Q13153 545 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 CABP7Q86V35 215 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 TC2NQ8N9U0 490 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 GSDMAQ96QA5 445 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 DISC1Q9NRI5 854 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
PDE6C-201ENST00000371447 MYH15Q9Y2K3 1946 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms