RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 CTDP1Q9Y5B0 961 aaPredicted RBP12.56□□□□□ -0.4
SSU72-202ENST00000359060 AKR1B10O60218 316 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 ADCY7P51828 1080 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 RAD51AP2Q09MP3 1159 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 CALCRLQ16602 461 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 MSL1Q68DK7 614 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
SSU72-202ENST00000359060 NEK8Q86SG6 692 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 SNX29Q8TEQ0 813 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 NOC4LQ9BVI4 516 aaKnown RBP12.56□□□□□ -0.4
SSU72-202ENST00000359060 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
SSU72-202ENST00000359060 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
SSU72-202ENST00000359060 FGFR1OPO95684 399 aaKnown RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 RHOXF2BP0C7M4 288 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 GPSM2P81274 684 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 KIAA0825Q8IV33 1275 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 ARFGAP3Q9NP61 516 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 COPB1P53618 953 aaKnown RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 CCDC181Q5TID7 509 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 GOLGA1Q92805 767 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 JADE2Q9NQC1 790 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 PARP4Q9UKK3 1724 aaKnown RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 CYLC1P35663 651 aaPredicted RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 MCM6Q14566 821 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 PKN1Q16512 942 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 TBCKQ8TEA7 893 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 SLC16A2P36021 539 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 ATP2C1P98194 919 aaPredicted RBP12.55□□□□□ -0.4
SSU72-202ENST00000359060 TOGARAM2Q6ZUX3 1019 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 CERS3Q8IU89 383 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 TMTC1Q8IUR5 882 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
SSU72-202ENST00000359060 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CYP26C1Q6V0L0 522 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 SLC39A2Q9NP94 309 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CTAGE15A4D2H0 777 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CTAGE8P0CG41 777 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 FAM193AP78312 1265 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 VPS72Q15906 364 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CTAGE6Q86UF2 777 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CTAGE4Q8IX94 777 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
SSU72-202ENST00000359060 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 TRIM49BA6NDI0 452 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 BBOX1O75936 387 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
SSU72-202ENST00000359060 GTF2F1P35269 517 aaKnown RBP eCLIP12.54□□□□□ -0.43e-7■□□□□ 9.7
SSU72-202ENST00000359060 SLC1A4P43007 532 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 ARID5AQ03989 594 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 PDE4CQ08493 712 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 KRT31Q15323 416 aa12.54□□□□□ -0.4
SSU72-202ENST00000359060 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
SSU72-202ENST00000359060 USO1O60763 962 aaKnown RBP12.53□□□□□ -0.4
SSU72-202ENST00000359060 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSU72-202ENST00000359060 MTF1Q14872 753 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 ACBD3Q9H3P7 528 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 PLCG1P19174 1290 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 SKIDA1Q1XH10 827 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 SLC10A5Q5PT55 438 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 ZNF658Q5TYW1 1059 aaPredicted RBP12.53□□□□□ -0.4
SSU72-202ENST00000359060 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSU72-202ENST00000359060 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 H7C1D1 291 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 CNNM4Q6P4Q7 775 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 CLEC10AQ8IUN9 316 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 ACRBPQ8NEB7 543 aa12.53□□□□□ -0.4
SSU72-202ENST00000359060 MACROD2A1Z1Q3 448 aa12.52□□□□□ -0.4
SSU72-202ENST00000359060 TRAF5O00463 557 aa12.52□□□□□ -0.4
SSU72-202ENST00000359060 SBK1Q52WX2 424 aa12.52□□□□□ -0.4
SSU72-202ENST00000359060 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.4
SSU72-202ENST00000359060 FBXO38Q6PIJ6 1188 aa12.52□□□□□ -0.4
SSU72-202ENST00000359060 KCTD1Q719H9 257 aa12.52□□□□□ -0.4
SSU72-202ENST00000359060 PRCPP42785 496 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 GRM4Q14833 912 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 USH1GQ495M9 461 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 CUL5Q93034 780 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 TEKT1Q969V4 418 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
SSU72-202ENST00000359060 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
SSU72-202ENST00000359060 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
SSU72-202ENST00000359060 CACNB3P54284 484 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms