RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PLS1Q14651 629 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 WDR44Q5JSH3 913 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 TUBGCP2Q9BSJ2 902 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
SMC4-201ENST00000344722 TRIM37O94972 964 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 NDUFA10O95299 355 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 RASSF7Q02833 373 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 CALCRLQ16602 461 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 PTPN21Q16825 1174 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 KIF23Q02241 960 aaPredicted RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 ITIH3Q06033 890 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 ANKRD65E5RJM6 399 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 LONP1P36776 959 aaKnown RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 WDR78Q5VTH9 848 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 NELFCDQ8IXH7 590 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 MYOCDQ8IZQ8 938 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 GLT8D2Q9H1C3 349 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 FOXP1Q9H334 677 aaPredicted RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 NOP53Q9NZM5 478 aaKnown RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 PFDN1O60925 122 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 HSP90AA5PQ58FG0 334 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 KCNF1Q9H3M0 494 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 RNASELQ05823 741 aaKnown RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 ZNF594Q96JF6 807 aaPredicted RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 MAGEF1Q9HAY2 307 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 ZCCHC17Q9NP64 241 aaKnown RBP19.87■□□□□ 0.77
SMC4-201ENST00000344722 SCOCQ9UIL1 159 aa19.87■□□□□ 0.77
SMC4-201ENST00000344722 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 ATP1A3P13637 1013 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 ITGA6P23229 1130 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 IL9RQ01113 521 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 TRIM6Q9C030 488 aaPredicted RBP19.86■□□□□ 0.77
SMC4-201ENST00000344722 ARHGEF25Q86VW2 580 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 CNOT6LQ96LI5 555 aaKnown RBP19.86■□□□□ 0.77
SMC4-201ENST00000344722 SAMSN1Q9NSI8 373 aaKnown RBP19.86■□□□□ 0.77
SMC4-201ENST00000344722 B4DLN1 442 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 CYP21A2P08686 494 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 H2AFZP0C0S5 128 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 TOGARAM2Q6ZUX3 1019 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 H2AFVQ71UI9 128 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 RILPQ96NA2 401 aa19.86■□□□□ 0.77
SMC4-201ENST00000344722 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 MYOM2P54296 1465 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 MFAP3LO75121 409 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 TXLNGQ9NUQ3 528 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
SMC4-201ENST00000344722 MED23Q9ULK4 1368 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 NEURL1BA8MQ27 555 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 THAP12O43422 761 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 FANCBQ8NB91 859 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 SAAL1Q96ER3 474 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 NCAPGQ9BPX3 1015 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 NT5C3AQ9H0P0 336 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 RWDD2AQ9UIY3 292 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 EXOC5O00471 708 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 BAG2O95816 211 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 POLR2FP61218 127 aaKnown RBP19.85■□□□□ 0.77
SMC4-201ENST00000344722 LRRC23Q53EV4 343 aaPredicted RBP19.85■□□□□ 0.77
SMC4-201ENST00000344722 PPP1R9AQ9ULJ8 1098 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 RFC1P35251 1148 aaPredicted RBP19.85■□□□□ 0.77
SMC4-201ENST00000344722 LRRC8CQ8TDW0 803 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 TBC1D7Q9P0N9 293 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
SMC4-201ENST00000344722 IFNAR2P48551 515 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 GLE1Q53GS7 698 aaKnown RBP19.84■□□□□ 0.77
SMC4-201ENST00000344722 ZNF804AQ7Z570 1209 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 ANKRD13CQ8N6S4 541 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 BBOF1Q8ND07 529 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 DHTKD1Q96HY7 919 aaPredicted RBP19.84■□□□□ 0.77
SMC4-201ENST00000344722 BZW2Q9Y6E2 419 aaKnown RBP19.84■□□□□ 0.77
SMC4-201ENST00000344722 PASKQ96RG2 1323 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 XRCC5P13010 732 aaKnown RBP19.84■□□□□ 0.77
SMC4-201ENST00000344722 PHBP35232 272 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 EIF3BP55884 814 aaKnown RBP19.84■□□□□ 0.77
SMC4-201ENST00000344722 NECTIN1Q15223 517 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 FAM133BQ5BKY9 247 aaKnown RBP19.84■□□□□ 0.77
SMC4-201ENST00000344722 CFAP61Q8NHU2 1237 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 THEGQ9P2T0 379 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 MRFAP1Q9Y605 127 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 COG7P83436 770 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 SMC1BQ8NDV3 1235 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 ARHGAP42A6NI28 874 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 GGCXP38435 758 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 ADCY7P51828 1080 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 ABCC10Q5T3U5 1492 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 SPZ1Q9BXG8 430 aa19.84■□□□□ 0.77
SMC4-201ENST00000344722 GMNNO75496 209 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 FGAP02671 866 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 SLFN14P0C7P3 912 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 ZNF658Q5TYW1 1059 aaPredicted RBP19.83■□□□□ 0.77
SMC4-201ENST00000344722 FBXO41Q8TF61 875 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 TCHPQ9BT92 498 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 DNM3Q9UQ16 869 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 KDM6BO15054 1643 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 PRDM1O75626 825 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 BLIDQ8IZY5 108 aa19.83■□□□□ 0.77
SMC4-201ENST00000344722 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMC4-201ENST00000344722 HMGB2P26583 209 aaKnown RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms