RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 CHMP2AO43633 222 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 CUL4BQ13620 913 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 SAR1BQ9Y6B6 198 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 H7C1D1 291 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 PRPF3O43395 683 aaKnown RBP18.27■□□□□ 0.52
RDX-201ENST00000343115 SCNN1DP51172 638 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 ADCY7P51828 1080 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.52
RDX-201ENST00000343115 CSF1RP07333 972 aa18.27■□□□□ 0.51
RDX-201ENST00000343115 BTDP43251 543 aa18.27■□□□□ 0.51
RDX-201ENST00000343115 OR52Z1P0C646 297 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
RDX-201ENST00000343115 USH1GQ495M9 461 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
RDX-201ENST00000343115 MEGF6O75095 1541 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 PARD6BQ9BYG5 372 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 CDC23Q9UJX2 597 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 TRIM49BA6NDI0 452 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 PP2D1A8MPX8 630 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 GYS2P54840 703 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 TUBGCP2Q9BSJ2 902 aa18.26■□□□□ 0.51
RDX-201ENST00000343115 KDM6AO15550 1401 aaPredicted RBP18.26■□□□□ 0.51
RDX-201ENST00000343115 KRT31Q15323 416 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 UTP14CQ5TAP6 766 aaKnown RBP18.25■□□□□ 0.51
RDX-201ENST00000343115 RGS22Q8NE09 1264 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 ATP2C2O75185 946 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 LRRC41Q15345 812 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 PDE11AQ9HCR9 933 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 ZCCHC17Q9NP64 241 aaKnown RBP18.25■□□□□ 0.51
RDX-201ENST00000343115 ZBTB21Q9ULJ3 1066 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 MINPP1Q9UNW1 487 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
RDX-201ENST00000343115 NEK8Q86SG6 692 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 CCDC65Q8IXS2 484 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 CASP7P55210 303 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 CCDC51Q96ER9 411 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 CPDO75976 1380 aa18.25■□□□□ 0.51
RDX-201ENST00000343115 SLC1A4P43007 532 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 DNM2P50570 870 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 ATRIPQ8WXE1 791 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 WDR24Q96S15 920 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 DDX41Q9UJV9 622 aaKnown RBP18.24■□□□□ 0.51
RDX-201ENST00000343115 PHLPP2Q6ZVD8 1323 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 LONP1P36776 959 aaKnown RBP18.24■□□□□ 0.51
RDX-201ENST00000343115 VAV2P52735 878 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 TMTC3Q6ZXV5 915 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 SND1Q7KZF4 910 aaKnown RBP eCLIP18.24■□□□□ 0.51
RDX-201ENST00000343115 CTNNBL1Q8WYA6 563 aaPredicted RBP18.24■□□□□ 0.51
RDX-201ENST00000343115 ST7Q9NRC1 585 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 PNMA6AP0CW24 399 aaPredicted RBP18.24■□□□□ 0.51
RDX-201ENST00000343115 LONRF2Q1L5Z9 754 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 NCAPH2Q6IBW4 605 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 SRGAP1Q7Z6B7 1085 aa18.24■□□□□ 0.51
RDX-201ENST00000343115 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
RDX-201ENST00000343115 COA7Q96BR5 231 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 BUB1O43683 1085 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 ALX1Q15699 326 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 MAEAQ7L5Y9 396 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 RABGGTAQ92696 567 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.23■□□□□ 0.51
RDX-201ENST00000343115 MRPS25P82663 173 aaKnown RBP18.23■□□□□ 0.51
RDX-201ENST00000343115 DOK7Q18PE1 504 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 CNOT6LQ96LI5 555 aaKnown RBP18.23■□□□□ 0.51
RDX-201ENST00000343115 PCDHA4Q9UN74 947 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
RDX-201ENST00000343115 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 NUP58Q9BVL2 599 aa18.23■□□□□ 0.51
RDX-201ENST00000343115 FBXO2Q9UK22 296 aaPredicted RBP18.23■□□□□ 0.51
RDX-201ENST00000343115 BPIFA3Q9BQP9 254 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 TMEM110-MUSTN1A8MSY1 372 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
RDX-201ENST00000343115 TNIP1Q15025 636 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 C8orf74Q6P047 294 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 PIGSQ96S52 555 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 FAM13AO94988 1023 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 TBCKQ8TEA7 893 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
RDX-201ENST00000343115 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
RDX-201ENST00000343115 SLC16A2P36021 539 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 RBM17Q96I25 401 aaKnown RBP18.21■□□□□ 0.51
RDX-201ENST00000343115 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.21■□□□□ 0.516e-7■■□□□ 12.2
RDX-201ENST00000343115 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 CETN3O15182 167 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 TUBB4BP68371 445 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
RDX-201ENST00000343115 ARHGAP23Q9P227 1491 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 SMIM23A6NLE4 172 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 PLCG1P19174 1290 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 CETN1Q12798 172 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 BRD3Q15059 726 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 ZNF658Q5TYW1 1059 aaPredicted RBP18.21■□□□□ 0.51
RDX-201ENST00000343115 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
RDX-201ENST00000343115 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 PCDHA12Q9UN75 941 aa18.21■□□□□ 0.51
RDX-201ENST00000343115 TUBBP07437 444 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms