RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 IGKV6D-41A0A0C4DH26 115 aa23.11■■□□□ 1.29
ITGA4-202ENST00000339307 RARBP10826 455 aa23.11■■□□□ 1.29
ITGA4-202ENST00000339307 ZNF792Q3KQV3 632 aa23.11■■□□□ 1.29
ITGA4-202ENST00000339307 RAVER2Q9HCJ3 691 aaKnown RBP23.11■■□□□ 1.29
ITGA4-202ENST00000339307 CNPY2Q9Y2B0 182 aa23.11■■□□□ 1.29
ITGA4-202ENST00000339307 GREB1LQ9C091 1923 aaPredicted RBP23.11■■□□□ 1.29
ITGA4-202ENST00000339307 ADCYAP1R1P41586 468 aa23.1■■□□□ 1.29
ITGA4-202ENST00000339307 IKQ13123 557 aaPredicted RBP23.1■■□□□ 1.29
ITGA4-202ENST00000339307 SLFN13Q68D06 897 aa23.1■■□□□ 1.29
ITGA4-202ENST00000339307 XPNPEP3Q9NQH7 507 aa23.1■■□□□ 1.29
ITGA4-202ENST00000339307 PRDM5Q9NQX1 630 aaPredicted RBP23.1■■□□□ 1.29
ITGA4-202ENST00000339307 FEM1BQ9UK73 627 aa23.1■■□□□ 1.29
ITGA4-202ENST00000339307 RIPK3Q9Y572 518 aa23.1■■□□□ 1.29
ITGA4-202ENST00000339307 MYH4Q9Y623 1939 aa23.1■■□□□ 1.29
ITGA4-202ENST00000339307 LRRC41Q15345 812 aa23.09■■□□□ 1.29
ITGA4-202ENST00000339307 SLC39A5Q6ZMH5 540 aa23.09■■□□□ 1.29
ITGA4-202ENST00000339307 NEDD1Q8NHV4 660 aa23.09■■□□□ 1.29
ITGA4-202ENST00000339307 MKL1Q969V6 931 aa23.09■■□□□ 1.29
ITGA4-202ENST00000339307 DIS3Q9Y2L1 958 aaKnown RBP23.09■■□□□ 1.29
ITGA4-202ENST00000339307 SZT2Q5T011 3432 aa23.09■■□□□ 1.29
ITGA4-202ENST00000339307 BMP3P12645 472 aa23.08■■□□□ 1.29
ITGA4-202ENST00000339307 TAL1P17542 331 aaPredicted RBP23.08■■□□□ 1.29
ITGA4-202ENST00000339307 CTDSPL2Q05D32 466 aa23.08■■□□□ 1.29
ITGA4-202ENST00000339307 TSPY2A6NKD2 308 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 TMEM232C9JQI7 657 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 PGK1P00558 417 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 ANKRD35Q8N283 1001 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 GMCL1P1Q8NEA9 526 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 EVI5LQ96CN4 794 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 NRBP1Q9UHY1 535 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 STX8Q9UNK0 236 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 MTMR7Q9Y216 660 aa23.08■■□□□ 1.28
ITGA4-202ENST00000339307 TRIM60Q495X7 471 aa23.07■■□□□ 1.28
ITGA4-202ENST00000339307 RNF180Q86T96 592 aa23.07■■□□□ 1.28
ITGA4-202ENST00000339307 INCENPQ9NQS7 918 aa23.07■■□□□ 1.28
ITGA4-202ENST00000339307 TOMM22Q9NS69 142 aa23.07■■□□□ 1.28
ITGA4-202ENST00000339307 HOMER2Q9NSB8 354 aa23.07■■□□□ 1.28
ITGA4-202ENST00000339307 PLXNA1Q9UIW2 1896 aa23.07■■□□□ 1.28
ITGA4-202ENST00000339307 RANBP6O60518 1105 aaKnown RBP23.06■■□□□ 1.28
ITGA4-202ENST00000339307 AKR1A1P14550 325 aa23.06■■□□□ 1.28
ITGA4-202ENST00000339307 SLC1A4P43007 532 aa23.06■■□□□ 1.28
ITGA4-202ENST00000339307 LRIT3Q3SXY7 679 aa23.06■■□□□ 1.28
ITGA4-202ENST00000339307 LENG1Q96BZ8 264 aaPredicted RBP23.06■■□□□ 1.28
ITGA4-202ENST00000339307 SLC38A10Q9HBR0 1119 aa23.06■■□□□ 1.28
ITGA4-202ENST00000339307 ZHX1Q9UKY1 873 aaPredicted RBP23.06■■□□□ 1.28
ITGA4-202ENST00000339307 SYNPO2Q9UMS6 1093 aa23.06■■□□□ 1.28
ITGA4-202ENST00000339307 MCCP23508 829 aa23.05■■□□□ 1.28
ITGA4-202ENST00000339307 PDE1AP54750 535 aa23.05■■□□□ 1.28
ITGA4-202ENST00000339307 VPS53Q5VIR6 699 aa23.05■■□□□ 1.28
ITGA4-202ENST00000339307 DEFB123Q8N688 67 aa23.05■■□□□ 1.28
ITGA4-202ENST00000339307 SALL3Q9BXA9 1300 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 TRIM6-TRIM34B2RNG4 842 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 ATP2A1O14983 1001 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 ZNF865P0CJ78 1059 aaPredicted RBP23.04■■□□□ 1.28
ITGA4-202ENST00000339307 STAT2P52630 851 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 PPP4R3BQ5MIZ7 849 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 Q7L0L9 218 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 FBXO40Q9UH90 709 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 FAM184BQ9ULE4 1060 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 SMCHD1A6NHR9 2005 aa23.04■■□□□ 1.28
ITGA4-202ENST00000339307 PLIN4Q96Q06 1357 aa23.03■■□□□ 1.28
ITGA4-202ENST00000339307 NMT2O60551 498 aa23.03■■□□□ 1.28
ITGA4-202ENST00000339307 HDAC1Q13547 482 aaPredicted RBP23.03■■□□□ 1.28
ITGA4-202ENST00000339307 RRP12Q5JTH9 1297 aaKnown RBP23.03■■□□□ 1.28
ITGA4-202ENST00000339307 B4GALNT3Q6L9W6 998 aa23.03■■□□□ 1.28
ITGA4-202ENST00000339307 CHURC1Q8WUH1 139 aa23.03■■□□□ 1.28
ITGA4-202ENST00000339307 KCTD1Q719H9 257 aa23.02■■□□□ 1.28
ITGA4-202ENST00000339307 MSL3Q8N5Y2 521 aaKnown RBP23.02■■□□□ 1.28
ITGA4-202ENST00000339307 CHST13Q8NET6 341 aa23.02■■□□□ 1.28
ITGA4-202ENST00000339307 RILPL2Q969X0 211 aa23.02■■□□□ 1.28
ITGA4-202ENST00000339307 LNPKQ9C0E8 428 aa23.02■■□□□ 1.28
ITGA4-202ENST00000339307 HELLSQ9NRZ9 838 aa23.02■■□□□ 1.28
ITGA4-202ENST00000339307 SYNGAP1Q96PV0 1343 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 SNAI1O95863 264 aaPredicted RBP23.01■■□□□ 1.27
ITGA4-202ENST00000339307 OAZ1P54368 228 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 CCDC174Q6PII3 467 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 FAM160B2Q86V87 743 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 STAG1Q8WVM7 1258 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 FAM227BQ96M60 508 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 PHF24Q9UPV7 400 aa23.01■■□□□ 1.27
ITGA4-202ENST00000339307 DNAJC25-GNG10A0A024R161 153 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 FOXP2O15409 715 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 SNAP25P60880 206 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 MCMDC2Q4G0Z9 681 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 GMCL1Q96IK5 515 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 AGBL1Q96MI9 1066 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 IL17RBQ9NRM6 502 aa23■■□□□ 1.27
ITGA4-202ENST00000339307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23■■□□□ 1.27
ITGA4-202ENST00000339307 FDX1P10109 184 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 TLE2Q04725 743 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 CCDC96Q2M329 555 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 GPR153Q6NV75 609 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 MAMDC4Q6UXC1 1216 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 BADQ92934 168 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 ACAD9Q9H845 621 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.99■■□□□ 1.27
ITGA4-202ENST00000339307 A0A1W2PQ45 241 aaPredicted RBP22.99■■□□□ 1.27
ITGA4-202ENST00000339307 A0A1W2PQY0 241 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 POTEB2H3BUK9 544 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 PQBP1O60828 265 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms