RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PDE4BQ07343 736 aa15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 NMIQ13287 307 aaPredicted RBP15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 SNRNP48Q6IEG0 339 aaKnown RBP15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 LRCH3Q96II8 777 aa15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 A0A0G2JMZ2 1700 aa15.9■□□□□ 0.14
NUDCD3-201ENST00000338427 TMEM232C9JQI7 657 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 SEPT4O43236 478 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 ZBED4O75132 1171 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 FGAP02671 866 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 KCTD2Q14681 263 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 FERMT2Q96AC1 680 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 SLC5A4Q9NY91 659 aa15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
NUDCD3-201ENST00000338427 TRIM6-TRIM34B2RNG4 842 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 BMP3P12645 472 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 MDM2Q00987 491 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 KCTD1Q719H9 257 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 ZNF589Q86UQ0 364 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 SMC5Q8IY18 1101 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 LENG1Q96BZ8 264 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 ZNF287Q9HBT7 754 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 HELLSQ9NRZ9 838 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 MYH4Q9Y623 1939 aa15.88■□□□□ 0.13
NUDCD3-201ENST00000338427 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 PGK1P00558 417 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 ZNF865P0CJ78 1059 aaPredicted RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 ADCYAP1R1P41586 468 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 HAND2P61296 217 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 LRRC41Q15345 812 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 MCMDC2Q4G0Z9 681 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 GMCL1P1Q8NEA9 526 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 DDX11Q96FC9 970 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 AGBL1Q96MI9 1066 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 TEX13BQ9BXU2 312 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 FEM1BQ9UK73 627 aa15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 CTDP1Q9Y5B0 961 aaPredicted RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
NUDCD3-201ENST00000338427 TSPY2A6NKD2 308 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 DNM1LO00429 736 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 MSCO60682 206 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 HSPD1P10809 573 aaKnown RBP15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 BMP8BP34820 402 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 RTP1P59025 263 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 ALX1Q15699 326 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 TTBK2Q6IQ55 1244 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 SLC39A5Q6ZMH5 540 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 CHD1LQ86WJ1 897 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 ARRDC4Q8NCT1 418 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 HOMER2Q9NSB8 354 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 ATP11BQ9Y2G3 1177 aa15.86■□□□□ 0.13
NUDCD3-201ENST00000338427 FRMPD3Q5JV73 1810 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 DNAJC25-GNG10A0A024R161 153 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 CNTN2Q02246 1040 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 STAG1Q8WVM7 1258 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 FGD4Q96M96 766 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 UBE2OQ9C0C9 1292 aaKnown RBP15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 TOMM22Q9NS69 142 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 DIS3Q9Y2L1 958 aaKnown RBP15.85■□□□□ 0.13
NUDCD3-201ENST00000338427 ATP2A1O14983 1001 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 FGRP09769 529 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 SDSP20132 328 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 SLC1A4P43007 532 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 NUCB1Q02818 461 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 RCSD1Q6JBY9 416 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 CCDC174Q6PII3 467 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 ZNF536O15090 1300 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 ZNF236Q9UL36 1845 aa15.84■□□□□ 0.13
NUDCD3-201ENST00000338427 KBTBD13C9JR72 458 aa15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 SLC16A2P36021 539 aa15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 IKQ13123 557 aaPredicted RBP15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 TRIM60Q495X7 471 aa15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 ANKRD35Q8N283 1001 aa15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 PURBQ96QR8 312 aaKnown RBP15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 XPNPEP3Q9NQH7 507 aa15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 PLIN4Q96Q06 1357 aa15.83■□□□□ 0.12
NUDCD3-201ENST00000338427 PLXNA1Q9UIW2 1896 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 ADCY6O43306 1168 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 ORC4O43929 436 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 RARBP10826 455 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 PTGS1P23219 599 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 COPB2P35606 906 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 MUM1L1Q5H9M0 696 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 CHURC1Q8WUH1 139 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 GMCL1Q96IK5 515 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms