RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SIRT1Q96EB6 747 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 FAM89AQ96GI7 184 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 HAUS7Q99871 368 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 PCDHB6Q9Y5E3 794 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 SLC5A1P13866 664 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 FMR1Q06787 632 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL2A1-201ENST00000337299 LETM2Q2VYF4 491 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 DCAF17Q5H9S7 520 aaPredicted RBP14.65□□□□□ -0.06
COL2A1-201ENST00000337299 CHP1Q99653 195 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL2A1-201ENST00000337299 ACTR5Q9H9F9 607 aaPredicted RBP14.65□□□□□ -0.06
COL2A1-201ENST00000337299 HPCAL4Q9UM19 191 aa14.65□□□□□ -0.06
COL2A1-201ENST00000337299 KRIT1O00522 736 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 GJC1P36383 396 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 SLCO1A2P46721 670 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 SATB1Q01826 763 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 KLHL30Q0D2K2 578 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 CALCOCO2Q13137 446 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 RASIP1Q5U651 963 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 VCXQ9H320 206 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 ABHD10Q9NUJ1 306 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 USH1CQ9Y6N9 552 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 DDB1Q16531 1140 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 DENND2CQ68D51 928 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 SHC4Q6S5L8 630 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 PEX26Q7Z412 305 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 NLRP14Q86W24 1093 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 PRM3Q9NNZ6 103 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 ATP8A1Q9Y2Q0 1164 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 LMBR1Q8WVP7 490 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 TUBGCP2Q9BSJ2 902 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 FAM114A2Q9NRY5 505 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 INTS9Q9NV88 658 aaKnown RBP14.64□□□□□ -0.07
COL2A1-201ENST00000337299 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
COL2A1-201ENST00000337299 PDE4BQ07343 736 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 SMCR8Q8TEV9 937 aaPredicted RBP14.63□□□□□ -0.07
COL2A1-201ENST00000337299 SMARCAL1Q9NZC9 954 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 PRAMEF22A3QJZ6 481 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 KIF28PB7ZC32 967 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 ALS2CLQ60I27 953 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 TRIM65Q6PJ69 517 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 GBP5Q96PP8 586 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 ELAC2Q9BQ52 826 aaKnown RBP14.63□□□□□ -0.07
COL2A1-201ENST00000337299 PLAAQ9Y263 795 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 MAST3O60307 1309 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 FXR1P51114 621 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL2A1-201ENST00000337299 PTGDRQ13258 359 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 DIXDC1Q155Q3 683 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 APOA5Q6Q788 366 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 IL17RAQ96F46 866 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 LRRC1Q9BTT6 524 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 NCK2O43639 380 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 PDHA1P08559 390 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 METTL16Q86W50 562 aaKnown RBP14.63□□□□□ -0.07
COL2A1-201ENST00000337299 ENGASEQ8NFI3 743 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 NHEJ1Q9H9Q4 299 aaPredicted RBP14.63□□□□□ -0.07
COL2A1-201ENST00000337299 GGT7Q9UJ14 662 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 ZMYM6O95789 1325 aa14.63□□□□□ -0.07
COL2A1-201ENST00000337299 H7C1D1 291 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 ALDH3A1P30838 453 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 MTMR3Q13615 1198 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 CAPRIN2Q6IMN6 1127 aaKnown RBP14.62□□□□□ -0.07
COL2A1-201ENST00000337299 NFRKBQ6P4R8 1299 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 EMBQ6PCB8 327 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 METTL22Q9BUU2 404 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-201ENST00000337299 MLXIPQ9HAP2 919 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 DONSONQ9NYP3 566 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 MED14O60244 1454 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 PLXNC1O60486 1568 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 H0Y3Z8 333 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 APBA1Q02410 837 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF444Q8N0Y2 327 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-201ENST00000337299 HVCN1Q96D96 273 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 CCDC77Q9BR77 488 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 LRRIQ1Q96JM4 1722 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 NEURL1BA8MQ27 555 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 RPN1P04843 607 aaKnown RBP14.62□□□□□ -0.07
COL2A1-201ENST00000337299 LLGL1Q15334 1064 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 NELFCDQ8IXH7 590 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 RPUSD2Q8IZ73 545 aaKnown RBP14.62□□□□□ -0.07
COL2A1-201ENST00000337299 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 TSC22D3Q99576 134 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-201ENST00000337299 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
COL2A1-201ENST00000337299 ACTN4O43707 911 aaKnown RBP14.61□□□□□ -0.07
COL2A1-201ENST00000337299 GSDMAQ96QA5 445 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 CCT8L2Q96SF2 557 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 STX2P32856 288 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 NAPAP54920 295 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 SEPT14Q6ZU15 432 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 GDAQ9Y2T3 454 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 ABCC3O15438 1527 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 PPP1R37O75864 691 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 PAX7P23759 505 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 MCUR1Q96AQ8 359 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 ANKZF1Q9H8Y5 726 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.61□□□□□ -0.074e-6■■■■■ 36.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms