RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GSDMDP57764 484 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 GSTO1P78417 241 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 ELF2Q15723 593 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 NYAP1Q6ZVC0 841 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 APBA3O96018 575 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 PARP1P09874 1014 aaKnown RBP10.03□□□□□ -0.8
SNCA-201ENST00000336904 CHRNA5P30532 468 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 TECP42680 631 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 PMS1P54277 932 aaKnown RBP10.03□□□□□ -0.8
SNCA-201ENST00000336904 CRY2Q49AN0 593 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
SNCA-201ENST00000336904 PDCL3Q9H2J4 239 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 LAMB1P07942 1786 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 ATP2B4P23634 1241 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 DGKHQ86XP1 1220 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 USP40Q9NVE5 1235 aa10.03□□□□□ -0.8
SNCA-201ENST00000336904 GPR75-ASB3A0A0A6YYF3 556 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 PPP1R3GB7ZBB8 358 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 RNF225M0QZC1 329 aaPredicted RBP10.02□□□□□ -0.8
SNCA-201ENST00000336904 ABL1P00519 1130 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 LDHCP07864 332 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 TXKP42681 527 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 RCAN1P53805 252 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 E2F4Q16254 413 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 POTEDQ86YR6 584 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 ZSCAN29Q8IWY8 852 aaPredicted RBP10.02□□□□□ -0.8
SNCA-201ENST00000336904 PDCL2Q8N4E4 241 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 ZNF579Q8NAF0 562 aaKnown RBP10.02□□□□□ -0.8
SNCA-201ENST00000336904 CCDC150Q8NCX0 1101 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 MTA3Q9BTC8 594 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 LZTFL1Q9NQ48 299 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 TFR2Q9UP52 801 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 THSD7AQ9UPZ6 1657 aa10.02□□□□□ -0.8
SNCA-201ENST00000336904 SPATA31A6Q5VVP1 1343 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 ZNF18P17022 549 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 RBL2Q08999 1139 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 CCDC96Q2M329 555 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 C4orf32Q8N8J7 132 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 TC2NQ8N9U0 490 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 MLKLQ8NB16 471 aa10.02□□□□□ -0.81
SNCA-201ENST00000336904 PDGFDQ9GZP0 370 aaPredicted RBP10.02□□□□□ -0.81
SNCA-201ENST00000336904 TDP2O95551 362 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 IL1R1P14778 569 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 PRCPP42785 496 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 NAALADL2Q58DX5 795 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 DTHD1Q6ZMT9 781 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 C16orf86Q6ZW13 317 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 TBCKQ8TEA7 893 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 FERMT2Q96AC1 680 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 NUP88Q99567 741 aaPredicted RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 IMPACTQ9P2X3 320 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 DDX60LQ5H9U9 1706 aaKnown RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 NAV1Q8NEY1 1877 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 PALM3A6NDB9 673 aaPredicted RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 POTEMA6NI47 508 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 URI1O94763 535 aaPredicted RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 UBA7P41226 1012 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 TNNI2P48788 182 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 CCDC178Q5BJE1 867 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 TMEM139Q8IV31 216 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 NELFBQ8WX92 580 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 BAG1Q99933 345 aaPredicted RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 POLD4Q9HCU8 107 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 BARHL2Q9NY43 387 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 CBFA2T2O43439 604 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 NEMFO60524 1076 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 GDF11O95390 407 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 PCP11498 1178 aaKnown RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 CASP14P31944 242 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 GTF2F1P35269 517 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNCA-201ENST00000336904 PPP4CP60510 307 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 RAD51AP2Q09MP3 1159 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 SPECC1LQ69YQ0 1117 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 SLC30A10Q6XR72 485 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 DYMQ7RTS9 669 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 IGSF22Q8N9C0 903 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 KIF18AQ8NI77 898 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 ENOX1Q8TC92 643 aaKnown RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 ZFP91Q96JP5 570 aaPredicted RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 WDR24Q96S15 920 aa10.01□□□□□ -0.81
SNCA-201ENST00000336904 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
SNCA-201ENST00000336904 LY75O60449 1722 aa10□□□□□ -0.81
SNCA-201ENST00000336904 SLC37A4O43826 429 aa10□□□□□ -0.81
SNCA-201ENST00000336904 RPN1P04843 607 aaKnown RBP10□□□□□ -0.81
SNCA-201ENST00000336904 FCER1AP12319 257 aa10□□□□□ -0.81
SNCA-201ENST00000336904 PLCG1P19174 1290 aa10□□□□□ -0.81
SNCA-201ENST00000336904 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
SNCA-201ENST00000336904 SH3RF1Q7Z6J0 888 aa10□□□□□ -0.81
SNCA-201ENST00000336904 KLHL34Q8N239 644 aa10□□□□□ -0.81
SNCA-201ENST00000336904 MRPL44Q9H9J2 332 aaKnown RBP10□□□□□ -0.81
SNCA-201ENST00000336904 PDS5AQ29RF7 1337 aaKnown RBP10□□□□□ -0.81
SNCA-201ENST00000336904 N4BP3O15049 544 aa10□□□□□ -0.81
SNCA-201ENST00000336904 BBOX1O75936 387 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms