RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
RPAIN-201ENST00000327154 RAVER2Q9HCJ3 691 aaKnown RBP16.78■□□□□ 0.28
RPAIN-201ENST00000327154 SYNPO2Q9UMS6 1093 aa16.78■□□□□ 0.28
RPAIN-201ENST00000327154 KBTBD13C9JR72 458 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 ATP2A1O14983 1001 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 BMP3P12645 472 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 TAL1P17542 331 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-201ENST00000327154 MDM2Q00987 491 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-201ENST00000327154 LRCH3Q96II8 777 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 UBE2OQ9C0C9 1292 aaKnown RBP16.77■□□□□ 0.28
RPAIN-201ENST00000327154 SLC38A10Q9HBR0 1119 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
RPAIN-201ENST00000327154 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.28
RPAIN-201ENST00000327154 ZNF236Q9UL36 1845 aa16.77■□□□□ 0.27
RPAIN-201ENST00000327154 TMEM232C9JQI7 657 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 ADCYAP1R1P41586 468 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 LRRC41Q15345 812 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 SLC39A5Q6ZMH5 540 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPAIN-201ENST00000327154 TACC3Q9Y6A5 838 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
RPAIN-201ENST00000327154 PLIN4Q96Q06 1357 aa16.76■□□□□ 0.27
RPAIN-201ENST00000327154 TSPY2A6NKD2 308 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 NMT2O60551 498 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 ZNF865P0CJ78 1059 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-201ENST00000327154 RARBP10826 455 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 MCCP23508 829 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 RTP1P59025 263 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 MCMDC2Q4G0Z9 681 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 TDHQ8IZJ6 230 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 RWDD1Q9H446 243 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-201ENST00000327154 XPNPEP3Q9NQH7 507 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 IL17RBQ9NRM6 502 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 CNPY2Q9Y2B0 182 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 ATP11BQ9Y2G3 1177 aa16.75■□□□□ 0.27
RPAIN-201ENST00000327154 SZT2Q5T011 3432 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 DNAJC25-GNG10A0A024R161 153 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 RANBP6O60518 1105 aaKnown RBP16.74■□□□□ 0.27
RPAIN-201ENST00000327154 PGK1P00558 417 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 SLC1A4P43007 532 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 AAMPQ13685 434 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 ALX1Q15699 326 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 CHURC1Q8WUH1 139 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 PARP14Q460N5 1801 aa16.74■□□□□ 0.27
RPAIN-201ENST00000327154 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 SNAI1O95863 264 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-201ENST00000327154 IGHDP01880 384 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 FGAP02671 866 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 STAT2P52630 851 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 OAZ1P54368 228 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 IKQ13123 557 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-201ENST00000327154 ANKRD35Q8N283 1001 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 MSL3Q8N5Y2 521 aaKnown RBP16.73■□□□□ 0.27
RPAIN-201ENST00000327154 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 STAG1Q8WVM7 1258 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-201ENST00000327154 PRKAG2Q9UGJ0 569 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 FBXO40Q9UH90 709 aa16.73■□□□□ 0.27
RPAIN-201ENST00000327154 FDX1P10109 184 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 AKR1A1P14550 325 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-201ENST00000327154 LRIT3Q3SXY7 679 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 TRIM60Q495X7 471 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 RCSD1Q6JBY9 416 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 MAMDC4Q6UXC1 1216 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 RNF180Q86T96 592 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 LENG1Q96BZ8 264 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-201ENST00000327154 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 HOMER2Q9NSB8 354 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 MTMR7Q9Y216 660 aa16.72■□□□□ 0.27
RPAIN-201ENST00000327154 COL11A1P12107 1806 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-201ENST00000327154 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 ORC4O43929 436 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 FGRP09769 529 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 HSPD1P10809 573 aaKnown RBP16.71■□□□□ 0.27
RPAIN-201ENST00000327154 SNAP25P60880 206 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 RRP12Q5JTH9 1297 aaKnown RBP16.71■□□□□ 0.27
RPAIN-201ENST00000327154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPAIN-201ENST00000327154 ZNF467Q7Z7K2 595 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-201ENST00000327154 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-201ENST00000327154 CHD1LQ86WJ1 897 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 TICAM2Q86XR7 235 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 FAM184BQ9ULE4 1060 aa16.71■□□□□ 0.27
RPAIN-201ENST00000327154 PHF24Q9UPV7 400 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms