RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DDAH1O94760 285 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 GDF11O95390 407 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 TPM1P09493 284 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 GNG11P61952 73 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 USH1GQ495M9 461 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 TYW1BQ6NUM6 668 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 PDCL2Q8N4E4 241 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 MNS1Q8NEH6 495 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 MYRIPQ8NFW9 859 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 PAGE5Q96GU1 130 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 PHF20Q9BVI0 1012 aa10.53□□□□□ -0.72
PRDM9-201ENST00000296682 BAZ2AQ9UIF9 1905 aaKnown RBP10.52□□□□□ -0.72
PRDM9-201ENST00000296682 BBOX1O75936 387 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 BMP6P22004 513 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 ASIC1P78348 528 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 UBE2SQ16763 222 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 WWC2Q6AWC2 1192 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 TTBK2Q6IQ55 1244 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 NOC3LQ8WTT2 800 aaKnown RBP10.52□□□□□ -0.72
PRDM9-201ENST00000296682 HPS3Q969F9 1004 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 SHISA4Q96DD7 197 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 VEZTQ9HBM0 779 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.72
PRDM9-201ENST00000296682 TBC1D7Q9P0N9 293 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 HPSEQ9Y251 543 aa10.52□□□□□ -0.72
PRDM9-201ENST00000296682 CLRN2A0PK11 232 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 TEX33O43247 280 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 AKR1B1P15121 316 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 GNAQP50148 359 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 KANK3Q6NY19 840 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 TRIM47Q96LD4 638 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 TIGD1Q96MW7 591 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 MYH1P12882 1939 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 FAM205AQ6ZU69 1335 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 DYNC1I1O14576 645 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 RASA1P20936 1047 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 TMEM60Q9H2L4 133 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 C6orf50Q9HD87 102 aa10.52□□□□□ -0.73
PRDM9-201ENST00000296682 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 NFIAQ12857 509 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 PFKFB3Q16875 520 aaPredicted RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 CNTNAP5Q8WYK1 1306 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 TRIM49BA6NDI0 452 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 KRT18P05783 430 aaKnown RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 COL23A1Q86Y22 540 aaPredicted RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 DAGLAQ9Y4D2 1042 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 PLCG2P16885 1265 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 TAL1P17542 331 aaPredicted RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 NCAPHQ15003 741 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 SHROOM1Q2M3G4 852 aaPredicted RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 IGSF22Q8N9C0 903 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 MLKLQ8NB16 471 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 TBCKQ8TEA7 893 aa10.51□□□□□ -0.73
PRDM9-201ENST00000296682 MAGEC2Q9UBF1 373 aaPredicted RBP10.51□□□□□ -0.73
PRDM9-201ENST00000296682 FLT1P17948 1338 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 RRP9O43818 475 aaKnown RBP10.5□□□□□ -0.73
PRDM9-201ENST00000296682 SLFN14P0C7P3 912 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 BAG1Q99933 345 aaPredicted RBP10.5□□□□□ -0.73
PRDM9-201ENST00000296682 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
PRDM9-201ENST00000296682 ZNF215Q9UL58 517 aaPredicted RBP10.5□□□□□ -0.73
PRDM9-201ENST00000296682 ANKRD31Q8N7Z5 1873 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 TCP10L2B9ZVM9 353 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 CYTH3O43739 400 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 ORC4O43929 436 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 RAD17O75943 681 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
PRDM9-201ENST00000296682 DGKHQ86XP1 1220 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 CCDC150Q8NCX0 1101 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 CCDC47Q96A33 483 aaKnown RBP10.5□□□□□ -0.73
PRDM9-201ENST00000296682 FERMT2Q96AC1 680 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 SERPINB13Q9UIV8 391 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 PCDHA4Q9UN74 947 aa10.5□□□□□ -0.73
PRDM9-201ENST00000296682 NEMFO60524 1076 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 PCP11498 1178 aaKnown RBP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 ZFPM1Q8IX07 1006 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 NELFBQ8WX92 580 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 TDRD3Q9H7E2 651 aaKnown RBP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 H0YIN7 160 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 C21orf2O43822 256 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 SLC1A4P43007 532 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 UBXN1Q04323 297 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 PDE4DQ08499 809 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 MTF1Q14872 753 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 REXO1Q8N1G1 1221 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms