RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 TTC12Q9H892 705 aaPredicted RBP10.57□□□□□ -0.72
CLRN1-201ENST00000295911 CLIP2Q9UDT6 1046 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
CLRN1-201ENST00000295911 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
CLRN1-201ENST00000295911 MYH4Q9Y623 1939 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 hCG_1642624A0A1W2PR95 340 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 PALM3A6NDB9 673 aaPredicted RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 MMP10P09238 476 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 FKBP1AP62942 108 aaKnown RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 NOLC1Q14978 699 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 NPY5RQ15761 445 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 DPCR1Q3MIW9 517 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 CT47A1Q5JQC4 288 aaPredicted RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 STYK1Q6J9G0 422 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 BLIDQ8IZY5 108 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 TRIML1Q8N9V2 468 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 CCDC12Q8WUD4 166 aaPredicted RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 SHISA4Q96DD7 197 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 ZNF830Q96NB3 372 aaPredicted RBP10.56□□□□□ -0.72
CLRN1-201ENST00000295911 TMEM47Q9BQJ4 181 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 SPZ1Q9BXG8 430 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 SPTLC3Q9NUV7 552 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 IMPACTQ9P2X3 320 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 MAD2L2Q9UI95 211 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 DAGLAQ9Y4D2 1042 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 MYO3BQ8WXR4 1341 aa10.56□□□□□ -0.72
CLRN1-201ENST00000295911 BIN1O00499 593 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 POLR2DO15514 142 aaKnown RBP10.55□□□□□ -0.72
CLRN1-201ENST00000295911 SMC2O95347 1197 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 ATP2B1P20020 1258 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 RXRBP28702 533 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 NOVP48745 357 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 PNOCQ13519 176 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 POSTNQ15063 836 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 SLC4A8Q2Y0W8 1093 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 NT5DC1Q5TFE4 455 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 ARL6IP4Q66PJ3 421 aaKnown RBP10.55□□□□□ -0.72
CLRN1-201ENST00000295911 HHIPL2Q6UWX4 724 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 CCDC186Q7Z3E2 898 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 PODNQ7Z5L7 613 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 METTL16Q86W50 562 aaKnown RBP10.55□□□□□ -0.72
CLRN1-201ENST00000295911 DAGLBQ8NCG7 672 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 KIAA1524Q8TCG1 905 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
CLRN1-201ENST00000295911 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 MRIQ9BWK5 157 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 CSRNP2Q9H175 543 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 PCDHA4Q9UN74 947 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 STX8Q9UNK0 236 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 PLIN4Q96Q06 1357 aa10.55□□□□□ -0.72
CLRN1-201ENST00000295911 SNED1Q8TER0 1413 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 H0YIN7 160 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 TPM2P07951 284 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 PARP1P09874 1014 aaKnown RBP10.54□□□□□ -0.72
CLRN1-201ENST00000295911 PTGS1P23219 599 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 GSDMDP57764 484 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 ATP2C1P98194 919 aaPredicted RBP10.54□□□□□ -0.72
CLRN1-201ENST00000295911 E2F4Q16254 413 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 MLKLQ8NB16 471 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 TTF2Q9UNY4 1162 aaKnown RBP10.54□□□□□ -0.72
CLRN1-201ENST00000295911 PCDHA5Q9Y5H7 936 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 C10orf71Q711Q0 1435 aa10.54□□□□□ -0.72
CLRN1-201ENST00000295911 SLX4Q8IY92 1834 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 KLRF2D3W0D1 207 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 hCG_1984214I3L0E3 225 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 CBFA2T2O43439 604 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 SLFN14P0C7P3 912 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 SARSP49591 514 aaKnown RBP10.53□□□□□ -0.72
CLRN1-201ENST00000295911 HDLBPQ00341 1268 aaKnown RBP10.53□□□□□ -0.72
CLRN1-201ENST00000295911 MYL5Q02045 173 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 PTGDRQ13258 359 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 ZNF174Q15697 407 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 PIK3AP1Q6ZUJ8 805 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 C2CD5Q86YS7 1000 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 ZNF713Q8N859 430 aaPredicted RBP10.53□□□□□ -0.72
CLRN1-201ENST00000295911 ZNF622Q969S3 477 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLRN1-201ENST00000295911 TEKT1Q969V4 418 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 KCTD12Q96CX2 325 aaKnown RBP10.53□□□□□ -0.72
CLRN1-201ENST00000295911 RRP36Q96EU6 259 aaKnown RBP10.53□□□□□ -0.72
CLRN1-201ENST00000295911 KCNF1Q9H3M0 494 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 USP40Q9NVE5 1235 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
CLRN1-201ENST00000295911 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms