RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 COG2Q14746 738 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 MCMDC2Q4G0Z9 681 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
CCDC58-201ENST00000291458 NCAPG2Q86XI2 1143 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 PXYLP1Q8TE99 480 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
CCDC58-201ENST00000291458 APBA2Q99767 749 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 MOV10L1Q9BXT6 1211 aaKnown RBP11.61□□□□□ -0.55
CCDC58-201ENST00000291458 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC58-201ENST00000291458 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 GJD2Q9UKL4 321 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 PLXNA1Q9UIW2 1896 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 TSPY2A6NKD2 308 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 RANBP6O60518 1105 aaKnown RBP11.6□□□□□ -0.55
CCDC58-201ENST00000291458 FARP2O94887 1054 aaPredicted RBP11.6□□□□□ -0.55
CCDC58-201ENST00000291458 NDUFB10O96000 172 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 ERCC3P19447 782 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 SDSP20132 328 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 CAMK2BQ13554 666 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 LBX2Q6XYB7 198 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 RASGRP2Q7LDG7 609 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 SPATC1LQ9H0A9 340 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 TACC3Q9Y6A5 838 aa11.6□□□□□ -0.55
CCDC58-201ENST00000291458 PLIN4Q96Q06 1357 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 ZNFX1Q9P2E3 1918 aaKnown RBP11.59□□□□□ -0.55
CCDC58-201ENST00000291458 ZNF236Q9UL36 1845 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 IGKV6D-41A0A0C4DH26 115 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 TFRCP02786 760 aaKnown RBP11.59□□□□□ -0.55
CCDC58-201ENST00000291458 GJB1P08034 283 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
CCDC58-201ENST00000291458 IKQ13123 557 aaPredicted RBP11.59□□□□□ -0.55
CCDC58-201ENST00000291458 MAP2K5Q13163 448 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 MORN1Q5T089 497 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 NPLOC4Q8TAT6 608 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 HOXC10Q9NYD6 342 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
CCDC58-201ENST00000291458 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
CCDC58-201ENST00000291458 ALPK3Q96L96 1907 aa11.58□□□□□ -0.55
CCDC58-201ENST00000291458 SLC15A5A6NIM6 579 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 F5H6K3 240 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 TTLL1O95922 423 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 GSPT1P15170 499 aaKnown RBP11.58□□□□□ -0.56
CCDC58-201ENST00000291458 PTPREP23469 700 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 ADORA2AP29274 412 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 CCND3P30281 292 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-201ENST00000291458 GJA8P48165 433 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 KLRC3Q07444 240 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 E2F4Q16254 413 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 CCDC96Q2M329 555 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 TTC22Q5TAA0 569 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 TBC1D10CQ8IV04 446 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 CPXCR1Q8N123 301 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 DIS3LQ8TF46 1054 aaKnown RBP11.58□□□□□ -0.56
CCDC58-201ENST00000291458 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
CCDC58-201ENST00000291458 MTMR4Q9NYA4 1195 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 FLRT1Q9NZU1 646 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
CCDC58-201ENST00000291458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC58-201ENST00000291458 VWA5AO00534 786 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 SGPL1O95470 568 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 FGAP02671 866 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 CNGA1P29973 690 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
CCDC58-201ENST00000291458 GRB14Q14449 540 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 PRPF38BQ5VTL8 546 aaKnown RBP11.57□□□□□ -0.56
CCDC58-201ENST00000291458 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 MB21D1Q8N884 522 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
CCDC58-201ENST00000291458 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 PAK6Q9NQU5 681 aaPredicted RBP11.57□□□□□ -0.56
CCDC58-201ENST00000291458 HOMER2Q9NSB8 354 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 NEDD4P46934 1319 aa11.57□□□□□ -0.56
CCDC58-201ENST00000291458 PGK2P07205 417 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 TAL1P17542 331 aaPredicted RBP11.56□□□□□ -0.56
CCDC58-201ENST00000291458 CYP2C19P33261 490 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 SNAP25P60880 206 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 MFSD14CQ5VZR4 134 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 ANO1Q5XXA6 986 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
CCDC58-201ENST00000291458 KCTD1Q719H9 257 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 USP6NLQ92738 828 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 DPF3Q92784 378 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 MMP19Q99542 508 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 IL25Q9H293 177 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 RAVER2Q9HCJ3 691 aaKnown RBP11.56□□□□□ -0.56
CCDC58-201ENST00000291458 TNRC18O15417 2968 aaPredicted RBP11.56□□□□□ -0.56
CCDC58-201ENST00000291458 FRMPD2Q68DX3 1309 aaPredicted RBP11.56□□□□□ -0.56
CCDC58-201ENST00000291458 RPTORQ8N122 1335 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms