RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 GREB1LQ9C091 1923 aaPredicted RBP27.43■■□□□ 1.98
HMG20B-201ENST00000262949 COL11A1P12107 1806 aaPredicted RBP27.42■■□□□ 1.98
HMG20B-201ENST00000262949 RTP1P59025 263 aa27.42■■□□□ 1.98
HMG20B-201ENST00000262949 TFAP4Q01664 338 aa27.42■■□□□ 1.98
HMG20B-201ENST00000262949 LRIT3Q3SXY7 679 aa27.42■■□□□ 1.98
HMG20B-201ENST00000262949 GMCL1P1Q8NEA9 526 aa27.42■■□□□ 1.98
HMG20B-201ENST00000262949 CRBNQ96SW2 442 aa27.42■■□□□ 1.98
HMG20B-201ENST00000262949 ATP11BQ9Y2G3 1177 aa27.42■■□□□ 1.98
HMG20B-201ENST00000262949 LRRC41Q15345 812 aa27.41■■□□□ 1.98
HMG20B-201ENST00000262949 LRRC47Q8N1G4 583 aaKnown RBP27.41■■□□□ 1.98
HMG20B-201ENST00000262949 EVI5LQ96CN4 794 aa27.41■■□□□ 1.98
HMG20B-201ENST00000262949 XPNPEP3Q9NQH7 507 aa27.41■■□□□ 1.98
HMG20B-201ENST00000262949 ZNFX1Q9P2E3 1918 aaKnown RBP27.41■■□□□ 1.98
HMG20B-201ENST00000262949 ATP2A1O14983 1001 aa27.4■■□□□ 1.98
HMG20B-201ENST00000262949 FAM47AQ5JRC9 791 aa27.4■■□□□ 1.98
HMG20B-201ENST00000262949 SLFN13Q68D06 897 aa27.4■■□□□ 1.98
HMG20B-201ENST00000262949 GPR153Q6NV75 609 aa27.4■■□□□ 1.98
HMG20B-201ENST00000262949 SLC39A5Q6ZMH5 540 aa27.4■■□□□ 1.98
HMG20B-201ENST00000262949 RNF180Q86T96 592 aa27.4■■□□□ 1.98
HMG20B-201ENST00000262949 MSL3Q8N5Y2 521 aaKnown RBP27.4■■□□□ 1.98
HMG20B-201ENST00000262949 PLIN4Q96Q06 1357 aa27.39■■□□□ 1.98
HMG20B-201ENST00000262949 FDX1P10109 184 aa27.39■■□□□ 1.98
HMG20B-201ENST00000262949 BMP3P12645 472 aa27.39■■□□□ 1.98
HMG20B-201ENST00000262949 AKR1A1P14550 325 aa27.39■■□□□ 1.98
HMG20B-201ENST00000262949 FBXO40Q9UH90 709 aa27.39■■□□□ 1.98
HMG20B-201ENST00000262949 ADCYAP1R1P41586 468 aa27.38■■□□□ 1.97
HMG20B-201ENST00000262949 IKQ13123 557 aaPredicted RBP27.38■■□□□ 1.97
HMG20B-201ENST00000262949 SLC38A10Q9HBR0 1119 aa27.38■■□□□ 1.97
HMG20B-201ENST00000262949 RAVER2Q9HCJ3 691 aaKnown RBP27.38■■□□□ 1.97
HMG20B-201ENST00000262949 RIPK3Q9Y572 518 aa27.38■■□□□ 1.97
HMG20B-201ENST00000262949 LAMA3Q16787 3333 aa27.38■■□□□ 1.97
HMG20B-201ENST00000262949 TSPY2A6NKD2 308 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 OAZ1P54368 228 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 HDAC1Q13547 482 aaPredicted RBP27.37■■□□□ 1.97
HMG20B-201ENST00000262949 CCDC129Q6ZRS4 1044 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 ANKRD35Q8N283 1001 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 CHURC1Q8WUH1 139 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 FERMT2Q96AC1 680 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 MYH4Q9Y623 1939 aa27.37■■□□□ 1.97
HMG20B-201ENST00000262949 TMEM232C9JQI7 657 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 SLC1A4P43007 532 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 STAT2P52630 851 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 CHST13Q8NET6 341 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 PRDM5Q9NQX1 630 aaPredicted RBP27.36■■□□□ 1.97
HMG20B-201ENST00000262949 STX8Q9UNK0 236 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 SYNGAP1Q96PV0 1343 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 SALL3Q9BXA9 1300 aa27.36■■□□□ 1.97
HMG20B-201ENST00000262949 TAL1P17542 331 aaPredicted RBP27.35■■□□□ 1.97
HMG20B-201ENST00000262949 PDE1AP54750 535 aa27.35■■□□□ 1.97
HMG20B-201ENST00000262949 FAM160B2Q86V87 743 aa27.35■■□□□ 1.97
HMG20B-201ENST00000262949 HELLSQ9NRZ9 838 aa27.35■■□□□ 1.97
HMG20B-201ENST00000262949 FAM184BQ9ULE4 1060 aa27.35■■□□□ 1.97
HMG20B-201ENST00000262949 PGK1P00558 417 aa27.34■■□□□ 1.97
HMG20B-201ENST00000262949 ZNF865P0CJ78 1059 aaPredicted RBP27.34■■□□□ 1.97
HMG20B-201ENST00000262949 CTDSPL2Q05D32 466 aa27.34■■□□□ 1.97
HMG20B-201ENST00000262949 AAMPQ13685 434 aa27.34■■□□□ 1.97
HMG20B-201ENST00000262949 TRIM60Q495X7 471 aa27.34■■□□□ 1.97
HMG20B-201ENST00000262949 PHF24Q9UPV7 400 aa27.34■■□□□ 1.97
HMG20B-201ENST00000262949 DNAJC25-GNG10A0A024R161 153 aa27.33■■□□□ 1.97
HMG20B-201ENST00000262949 RANBP6O60518 1105 aaKnown RBP27.33■■□□□ 1.97
HMG20B-201ENST00000262949 SNX17Q15036 470 aa27.33■■□□□ 1.97
HMG20B-201ENST00000262949 MAMDC4Q6UXC1 1216 aa27.33■■□□□ 1.97
HMG20B-201ENST00000262949 ZNF467Q7Z7K2 595 aaPredicted RBP27.33■■□□□ 1.97
HMG20B-201ENST00000262949 DEFB123Q8N688 67 aa27.33■■□□□ 1.97
HMG20B-201ENST00000262949 GMCL1Q96IK5 515 aa27.33■■□□□ 1.97
HMG20B-201ENST00000262949 ZHX1Q9UKY1 873 aaPredicted RBP27.33■■□□□ 1.97
HMG20B-201ENST00000262949 PLXNA1Q9UIW2 1896 aa27.33■■□□□ 1.97
HMG20B-201ENST00000262949 MCCP23508 829 aa27.32■■□□□ 1.96
HMG20B-201ENST00000262949 C1orf53Q5VUE5 145 aa27.32■■□□□ 1.96
HMG20B-201ENST00000262949 TICAM2Q86XR7 235 aa27.32■■□□□ 1.96
HMG20B-201ENST00000262949 STAG1Q8WVM7 1258 aa27.32■■□□□ 1.96
HMG20B-201ENST00000262949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.32■■□□□ 1.96
HMG20B-201ENST00000262949 SMCHD1A6NHR9 2005 aa27.31■■□□□ 1.96
HMG20B-201ENST00000262949 DNAH12Q6ZR08 3092 aa27.31■■□□□ 1.96
HMG20B-201ENST00000262949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.31■■□□□ 1.96
HMG20B-201ENST00000262949 TOMM22Q9NS69 142 aa27.31■■□□□ 1.96
HMG20B-201ENST00000262949 HOMER2Q9NSB8 354 aa27.31■■□□□ 1.96
HMG20B-201ENST00000262949 ANAPC4Q9UJX5 808 aa27.31■■□□□ 1.96
HMG20B-201ENST00000262949 TRIM6-TRIM34B2RNG4 842 aa27.3■■□□□ 1.96
HMG20B-201ENST00000262949 SNAI1O95863 264 aaPredicted RBP27.3■■□□□ 1.96
HMG20B-201ENST00000262949 ALX1Q15699 326 aa27.3■■□□□ 1.96
HMG20B-201ENST00000262949 MCMDC2Q4G0Z9 681 aa27.3■■□□□ 1.96
HMG20B-201ENST00000262949 VPS53Q5VIR6 699 aa27.3■■□□□ 1.96
HMG20B-201ENST00000262949 CHMP4CQ96CF2 233 aa27.3■■□□□ 1.96
HMG20B-201ENST00000262949 TSEN34Q9BSV6 310 aaKnown RBP27.3■■□□□ 1.96
HMG20B-201ENST00000262949 RWDD1Q9H446 243 aaPredicted RBP27.3■■□□□ 1.96
HMG20B-201ENST00000262949 ACAD9Q9H845 621 aa27.3■■□□□ 1.96
HMG20B-201ENST00000262949 RCSD1Q6JBY9 416 aa27.29■■□□□ 1.96
HMG20B-201ENST00000262949 NUP133Q8WUM0 1156 aa27.29■■□□□ 1.96
HMG20B-201ENST00000262949 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
HMG20B-201ENST00000262949 ABHD16BQ9H3Z7 469 aa27.29■■□□□ 1.96
HMG20B-201ENST00000262949 SPC25Q9HBM1 224 aa27.29■■□□□ 1.96
HMG20B-201ENST00000262949 INCENPQ9NQS7 918 aa27.29■■□□□ 1.96
HMG20B-201ENST00000262949 FOXP2O15409 715 aa27.28■■□□□ 1.96
HMG20B-201ENST00000262949 PLA2G6O60733 806 aa27.28■■□□□ 1.96
HMG20B-201ENST00000262949 ACVR2BQ13705 512 aa27.28■■□□□ 1.96
HMG20B-201ENST00000262949 TKFCQ3LXA3 575 aa27.28■■□□□ 1.96
HMG20B-201ENST00000262949 KCTD1Q719H9 257 aa27.28■■□□□ 1.96
HMG20B-201ENST00000262949 LENG1Q96BZ8 264 aaPredicted RBP27.28■■□□□ 1.96
HMG20B-201ENST00000262949 IL17RBQ9NRM6 502 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms