RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 HIP1RO75146 1068 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 RASSF9O75901 435 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 IFNAR2P48551 515 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 TNNC1P63316 161 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 PDCD2Q16342 344 aaPredicted RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 ANKRD20A8PQ5CZ79 823 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 WLSQ5T9L3 541 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 YTHDF3Q7Z739 585 aaKnown RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 AENQ8WTP8 325 aaKnown RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 OSBPL9Q96SU4 736 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 OSBPL1AQ9BXW6 950 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 NHEJ1Q9H9Q4 299 aaPredicted RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 NPHP4O75161 1426 aaPredicted RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 AMPD2Q01433 879 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 PTPROQ16827 1216 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 KLHL29Q96CT2 875 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 MLXIPQ9HAP2 919 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 ANGEL1Q9UNK9 670 aaKnown RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 KIF1BO60333 1816 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 KDRP35968 1356 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 GRIN1Q05586 938 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 EPSTI1Q96J88 318 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 VPS54Q9P1Q0 977 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 HPSEQ9Y251 543 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 B4E1Z4 1266 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 ARID5AQ03989 594 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 ZNF174Q15697 407 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 CCDC6Q16204 474 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 USP49Q70CQ1 688 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 MAEAQ7L5Y9 396 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 CCDC85AQ96PX6 553 aaPredicted RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 IDH1O75874 414 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 UPP2O95045 317 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 PECAM1P16284 738 aaPredicted RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 LAMB3Q13751 1172 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 KRT26Q7Z3Y9 468 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 CCHCR1Q8TD31 782 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 IFT74Q96LB3 600 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 ELAC2Q9BQ52 826 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 A0A087WZG4 1122 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 ANO9A1A5B4 782 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 GNAT1P11488 350 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 BZW1Q7L1Q6 419 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 PLIN2Q99541 437 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 LACRTQ9GZZ8 138 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 PAPOLBQ9NRJ5 636 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 ACEP12821 1306 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 CRB1P82279 1406 aa9.69□□□□□ -0.86
SUPT16H-201ENST00000216297 PSMA7O14818 248 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 NOX5Q96PH1 765 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 LGR6Q9HBX8 967 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 SNX12Q9UMY4 172 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 KIAA1210Q9ULL0 1709 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 B4DLN1 442 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 TRIM37O94972 964 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 CTCFP49711 727 aaPredicted RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 MAGOHP61326 146 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 PAPD7Q5XG87 772 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 MAGOHBQ96A72 148 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 MS4A14Q96JA4 679 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 HAUS7Q99871 368 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 FAM207AQ9NSI2 230 aaPredicted RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 RMND1Q9NWS8 449 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 CEP126Q9P2H0 1117 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 C15orf41Q9Y2V0 281 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 DNM1LO00429 736 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 FGAP02671 866 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 PARP1P09874 1014 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 PAPOLAP51003 745 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 NR5A1Q13285 461 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 GLE1Q53GS7 698 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 TCP11X2Q5H9J9 407 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 ARMC9Q7Z3E5 817 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 NOC4LQ9BVI4 516 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 PRPF4BQ13523 1007 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 CCDC38Q502W7 563 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 PPP4R3AQ6IN85 833 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 C3orf20Q8ND61 904 aa9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 RBM12Q9NTZ6 932 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-201ENST00000216297 ZSCAN5CA6NGD5 496 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 GBP1P32455 592 aa9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 PRPHP41219 470 aa9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 EIF4A1P60842 406 aaKnown RBP9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 PROSER3Q2NL68 480 aa9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 MGARPQ8TDB4 240 aa9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 SYMPKQ92797 1274 aaKnown RBP9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 GSDMAQ96QA5 445 aa9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
SUPT16H-201ENST00000216297 PPP2R2AP63151 447 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms