RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Klhl40Q9D783 621 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Echdc1Q9D9V3 322 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tmem191cQ9JJB1 302 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 IghaA0A0A6YXW6 389 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 P3h1Q3V1T4 739 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Sdccag8Q80UF4 717 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Vps52Q8C754 723 aaKnown RBP13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rabep2Q91WG2 554 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Abcf2Q99LE6 628 aaKnown RBP13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Stx17Q9D0I4 301 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tsga8Q9JJL0 238 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Palm3A2TJV2 734 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Arhgap42B2RQE8 841 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Mcmdc2E9Q956 681 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Pip4k2aO70172 405 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Lnx1O70263 728 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Csrnp1P59054 583 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Mier3Q3UHF3 551 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 CyldQ80TQ2 952 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ccdc122Q8BVN0 290 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 AopepQ8BXQ6 817 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Serpinb13Q8CDC0 389 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Farp2Q91VS8 1065 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rrp1bQ91YK2 724 aaKnown RBP13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Srgap2Q91Z67 1071 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Acsbg1Q99PU5 721 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 UvssaQ9D479 717 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Gsdmdc1Q9D8T2 487 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 MefvQ9JJ26 767 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 GgcxQ9QYC7 757 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Pdcd7Q9WTY1 482 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Card9A2AIV8 536 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Mmp8O70138 465 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 PtprcP06800 1291 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Traf5P70191 558 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cct4P80315 539 aaKnown RBP13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Kif1bpQ6ZPU9 617 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 TraipQ8VIG6 470 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Abtb1Q99LJ2 478 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Krt16Q9Z2K1 469 aa13.19□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Kcna3P16390 528 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Eef2P58252 858 aaKnown RBP13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Lrch1P62046 709 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Pla2g4eQ50L42 875 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rnf220Q6PDX6 566 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Trpd52l3Q9CQ14 231 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Serbp1Q9CY58 407 aaKnown RBP13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cbx3P23198 183 aaKnown RBP13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tmod1P49813 359 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Palb2Q3U0P1 1104 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 GpkowQ56A08 488 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cyfip2Q5SQX6 1253 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Irf9Q61179 399 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 CapslQ6P8Y1 208 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Asic3Q6X1Y6 530 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Vipas39Q8BGQ1 491 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rab11fip4Q8BQP8 635 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 C1qtnf12Q8R2Z0 308 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Klrb1fQ8VD98 217 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 AslQ91YI0 464 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tulp1Q9Z273 543 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Apba1B2RUJ5 842 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Nova2D3YVV7 556 aaKnown RBP13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Elmsan1E9Q2I4 1089 aaKnown RBP13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Chil3O35744 398 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Eef1bO70251 225 aaKnown RBP13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ier5O89113 308 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Arl1P61211 181 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tcp11Q01755 566 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Zfp202Q8C879 641 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 GckrQ91X44 587 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tab2Q99K90 693 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Smtnl1Q99LM3 459 aa13.18□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Nek1P51954 1203 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ddx17Q501J6 650 aaKnown RBP13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 F13a1Q8BH61 732 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Atp6v1b1Q91YH6 513 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Msantd4Q91YU3 345 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Col4a3bpQ9EQG9 624 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Bicdl1A0JNT9 577 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Gm5624F6ZZG8 207 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 HpdP49429 393 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Kdm7aQ3UWM4 940 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cyp4f39Q8BGU0 532 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Me3Q8BMF3 604 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Pde3aQ9Z0X4 1141 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Kiaa0556Q8C753 1610 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 PtprmP28828 1452 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Flot1O08917 428 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 IkbkgO88522 412 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 NptxrQ99J85 493 aa13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Acot9Q9R0X4 439 aaKnown RBP13.17□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rbm8a2A0A0N4SUH6 174 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Chmp6P0C0A3 200 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 KaznQ69ZS8 779 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Wdr91Q7TMQ7 748 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Erich5Q8K0S2 362 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Atf7Q8R0S1 413 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Hs2st1Q8R3H7 356 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rapgef3Q8VCC8 918 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms