RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Usp50Q6P8X6 390 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Vipas39Q8BGQ1 491 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cfap69Q8BH53 942 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 CpvlQ9D3S9 478 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Gm36210A0A1B0GS00 229 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Mapkapk5O54992 473 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 GscQ02591 256 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cfap100Q80VN0 613 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Srgap2Q91Z67 1071 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 AllcQ9JHX6 414 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Myo1cQ9WTI7 1063 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Gm5934D3Z4U6 212 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Krt78E9Q0F0 1068 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Gm10378F6XQQ1 160 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Snx12O70493 165 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Rasa2P58069 847 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Meis3P97368 378 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Tmem35bQ3U0Y2 150 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Mindy1Q76LS9 468 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ttll4Q80UG8 1193 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 CutaQ9CQ89 177 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Sar1bQ9CQC9 198 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 1700018B08RikQ9DA83 213 aa16.81■□□□□ 0.28
Nup54-201ENSMUST00000038514 Pet2A2AHY8 747 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Dnajc21E9Q8D0 531 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Sema3fO88632 785 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ftl1P29391 183 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Rtkn2Q14B46 604 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Recql4Q75NR7 1216 aaKnown RBP16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cracr2bQ80ZJ8 394 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Miga2Q8BK03 593 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 SowahdQ8BY98 327 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Spata16Q8C636 571 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Tmem134Q8R0J4 195 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Clstn1Q9EPL2 979 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 VirmaA2AIV2 1811 aaKnown RBP16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Adgra3Q7TT36 1310 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Zfp853A0A1D5RM95 733 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ddx23D3Z0M9 819 aaKnown RBP16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cct6aP80317 531 aaKnown RBP16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 IntuQ059U7 942 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ppp1r21Q3TDD9 780 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ddx3yQ62095 658 aaKnown RBP16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Txndc16Q7TN22 820 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ccdc122Q8BVN0 290 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Pla2g12bQ99P27 195 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 NgdnQ9DB96 315 aaKnown RBP16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Mapk8ip1Q9WVI9 707 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Trip6Q9Z1Y4 480 aa16.8■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ube3aO08759 870 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ppef2O35385 757 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Stx8O88983 236 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Parp1P11103 1013 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 PpardP35396 440 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Gpbp1Q6NXH3 473 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Hook2Q7TMK6 716 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 WhrnQ80VW5 918 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Lrrc15Q80X72 579 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cyp4f39Q8BGU0 532 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Bpifb6Q8BU51 449 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Leng8Q8CBY3 785 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 MymkQ9D1N4 221 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Lgr5Q9Z1P4 907 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 PurbO35295 324 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Enc1O35709 589 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 AgtP11859 477 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Aco1P28271 889 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Rnf40Q3U319 1001 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 SfswapQ3USH5 945 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ccp110Q7TSH4 1004 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Adcy2Q80TL1 1090 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Prpf6Q91YR7 941 aaKnown RBP16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Fsip1Q9D3V5 435 aa16.79■□□□□ 0.28
Nup54-201ENSMUST00000038514 Frmpd4A2AFR3 1320 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Sec14l1A8Y5H7 715 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Apol7aB2RT54 418 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ptpn12P35831 775 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Kifap3P70188 793 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Snai1Q02085 264 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Exoc5Q3TPX4 708 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Zc3h12cQ5DTV4 884 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Alpk1Q9CXB8 1231 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Stag2O35638 1231 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Stim1P70302 685 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Mum1l1Q4VA55 681 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ccdc42Q5SV66 316 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 LrmpQ60664 539 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cep95Q8BVV7 827 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Dclk3Q8BWQ5 790 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Ushbp1Q8R370 680 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 EpgnQ924X1 152 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Syce1Q9D495 329 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Lonrf3Q9D4H7 753 aa16.78■□□□□ 0.28
Nup54-201ENSMUST00000038514 Nr1i2O54915 431 aa16.77■□□□□ 0.28
Nup54-201ENSMUST00000038514 Stim2P83093 746 aa16.77■□□□□ 0.28
Nup54-201ENSMUST00000038514 Morc2bQ8C5W4 1022 aa16.77■□□□□ 0.28
Nup54-201ENSMUST00000038514 Nup133Q8R0G9 1155 aa16.77■□□□□ 0.28
Nup54-201ENSMUST00000038514 Eif3cQ8R1B4 911 aaKnown RBP16.77■□□□□ 0.28
Nup54-201ENSMUST00000038514 Cd2apQ9JLQ0 637 aa16.77■□□□□ 0.28
Nup54-201ENSMUST00000038514 Pex3Q9QXY9 372 aa16.77■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms