RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Clic6Q8BHB9 596 aa20.52■□□□□ 0.88
Chmp6-201ENSMUST00000026434 Ces3bQ8VCU1 571 aa20.52■□□□□ 0.88
Chmp6-201ENSMUST00000026434 Apobec3Q99J72 440 aaKnown RBP20.52■□□□□ 0.88
Chmp6-201ENSMUST00000026434 Homer1Q9Z2Y3 366 aa20.52■□□□□ 0.88
Chmp6-201ENSMUST00000026434 Myh8P13542 1937 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Herc3A6H6S0 1050 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ccdc121E9Q6D3 323 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 GmnnO88513 206 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Nr5a1P33242 462 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Sema3eP70275 775 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Gabpb2P81069 414 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Lilrb3P97484 841 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Cnga2Q62398 664 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Exoc8Q6PGF7 716 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Skor1Q8BX46 964 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Klhl30Q8C3F7 581 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Inpp5bQ8K337 993 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Rbm19Q8R3C6 952 aaKnown RBP20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Sgpp1Q9JI99 430 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Irx4Q9QY61 515 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Btaf1E9QAE3 1848 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Cdc27A2A6Q5 825 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Pla2g4bP0C871 782 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Mmp14P53690 582 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Tshz1Q5DTH5 1084 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Tnni3kQ5GIG6 834 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Taok2Q6ZQ29 1240 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Kctd3Q8BFX3 815 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ccz1Q8C1Y8 480 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 GlyctkQ8QZY2 523 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Kctd10Q922M3 315 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Galntl5Q9D4M9 431 aa20.51■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ecm29Q6PDI5 1840 aa20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Cul4bA2A432 970 aaKnown RBP20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Map7d1A2AJI0 846 aa20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Tmem132bF7BAB2 1078 aa20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 LtkP08923 888 aa20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ercc6lQ8BHK9 1240 aa20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Hdac9Q99N13 588 aa20.5■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Palm3A2TJV2 734 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Mx1P09922 631 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Msh3P13705 1091 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ptgs1P22437 602 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Nedd1P33215 660 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Eif5P59325 429 aaKnown RBP20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Nbr1P97432 988 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Krt87Q6IMF0 495 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Gpbp1Q6NXH3 473 aaKnown RBP20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ube2oQ6ZPJ3 1288 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Mxd3Q80US8 206 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Caps2Q8BUG5 550 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ccdc38Q8CDN8 563 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Brd3Q8K2F0 726 aaKnown RBP20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 BccipQ9CWI3 316 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Cul5Q9D5V5 780 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 SynrgQ5SV85 1306 aa20.49■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Col5a2Q3U962 1497 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 4932429P05RikA2ADI4 785 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Bpifb4A2BGH0 617 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Flvcr1B2RXV4 560 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Cdc25aP48964 514 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 LtbrP50284 415 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Pnma5Q5DTT8 618 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Panx2Q6IMP4 677 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Pkd2l2Q9JLG4 621 aa20.48■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Krt78E9Q0F0 1068 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Gxylt1Q3UHH8 404 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Dusp9Q7TNL7 452 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ushbp1Q8R370 680 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Snrnp35Q9D384 244 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Tmem191cQ9JJB1 302 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Fxr2Q9WVR4 673 aaKnown RBP20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Pcdh11xF6ZNL5 1338 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Flt1P35969 1333 aa20.47■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Stim1P70302 685 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ncf1Q09014 390 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Arhgef2Q60875 985 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Mtss1lQ6P9S0 715 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Rps6ka5Q8C050 863 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Plcg2Q8CIH5 1265 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ppp1r11Q8K1L5 131 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 AdpgkQ8VDL4 496 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Cabp7Q91ZM8 215 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Gmcl1Q920G9 524 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Tomm22Q9CPQ3 142 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Efhd1Q9D4J1 240 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 AdnpQ9Z103 1108 aaKnown RBP20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ccdc6D3YZP9 469 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Specc1lQ2KN98 1118 aaKnown RBP20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Swap70Q6A028 585 aaKnown RBP20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Krt39Q6IFX4 482 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Krt79Q8VED5 531 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Ifi202Q9R002 445 aa20.46■□□□□ 0.87
Chmp6-201ENSMUST00000026434 Lbhd1A0A087WPA0 259 aa20.45■□□□□ 0.86
Chmp6-201ENSMUST00000026434 1700003F12RikA2AKE5 210 aa20.45■□□□□ 0.86
Chmp6-201ENSMUST00000026434 Eddm13E9Q7F5 164 aa20.45■□□□□ 0.86
Chmp6-201ENSMUST00000026434 Csf1rP09581 977 aa20.45■□□□□ 0.86
Chmp6-201ENSMUST00000026434 CnpP16330 420 aa20.45■□□□□ 0.86
Chmp6-201ENSMUST00000026434 Tbx2Q60707 711 aa20.45■□□□□ 0.86
Chmp6-201ENSMUST00000026434 Ccna1Q61456 421 aa20.45■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms