RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W IST3P40565 148 aaPredicted RBP6.15□□□□□ -1.42
TFB4YPR056W CHS6P40955 746 aa6.15□□□□□ -1.42
TFB4YPR056W CEP3P40969 608 aa6.15□□□□□ -1.42
TFB4YPR056W GLO1P50107 326 aa6.15□□□□□ -1.42
TFB4YPR056W BRE5P53741 515 aaKnown RBP6.15□□□□□ -1.42
TFB4YPR056W YNL050CP53952 270 aa6.15□□□□□ -1.42
TFB4YPR056W REG1Q00816 1014 aa6.15□□□□□ -1.42
TFB4YPR056W ACS1Q01574 713 aa6.15□□□□□ -1.42
TFB4YPR056W RNT1Q02555 471 aa6.15□□□□□ -1.42
TFB4YPR056W SMA1Q02651 245 aa6.15□□□□□ -1.42
TFB4YPR056W YMR210WQ03649 449 aa6.15□□□□□ -1.42
TFB4YPR056W ARX1Q03862 593 aaKnown RBP6.15□□□□□ -1.42
TFB4YPR056W ARR1Q06596 294 aa6.15□□□□□ -1.42
TFB4YPR056W SWM1Q12379 170 aa6.15□□□□□ -1.42
TFB4YPR056W RPL6BP05739 176 aaKnown RBP6.14□□□□□ -1.43
TFB4YPR056W RPL1AP0CX43 217 aaKnown RBP6.14□□□□□ -1.43
TFB4YPR056W RPL1BP0CX44 217 aaKnown RBP6.14□□□□□ -1.43
TFB4YPR056W LTV1P34078 463 aa6.14□□□□□ -1.43
TFB4YPR056W PXL1P36166 706 aa6.14□□□□□ -1.43
TFB4YPR056W VID24P38263 362 aa6.14□□□□□ -1.43
TFB4YPR056W SLX1P38324 304 aa6.14□□□□□ -1.43
TFB4YPR056W SUL1P38359 859 aa6.14□□□□□ -1.43
TFB4YPR056W MET28P40573 187 aa6.14□□□□□ -1.43
TFB4YPR056W GCN20P43535 752 aaKnown RBP6.14□□□□□ -1.43
TFB4YPR056W VID30P53076 958 aa6.14□□□□□ -1.43
TFB4YPR056W CGR1P53188 120 aa6.14□□□□□ -1.43
TFB4YPR056W DCP2P53550 970 aaKnown RBP6.14□□□□□ -1.43
TFB4YPR056W RPL6AQ02326 176 aaKnown RBP6.14□□□□□ -1.43
TFB4YPR056W MSC3Q05812 728 aa6.14□□□□□ -1.43
TFB4YPR056W THI22Q06490 572 aa6.14□□□□□ -1.43
TFB4YPR056W CRD1Q07560 283 aa6.14□□□□□ -1.43
TFB4YPR056W ATG11Q12527 1178 aa6.14□□□□□ -1.43
TFB4YPR056W RPS9AO13516 197 aaKnown RBP6.13□□□□□ -1.43
TFB4YPR056W PRC1P00729 532 aa6.13□□□□□ -1.43
TFB4YPR056W TUB3P09734 445 aaKnown RBP6.13□□□□□ -1.43
TFB4YPR056W TY2A-LR1P0C2J4 438 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-FP0CX61 438 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-GR2P0CX62 438 aa6.13□□□□□ -1.43
TFB4YPR056W ARO3P14843 370 aaKnown RBP6.13□□□□□ -1.43
TFB4YPR056W MSS116P15424 664 aaKnown RBP6.13□□□□□ -1.43
TFB4YPR056W CDC42P19073 191 aa6.13□□□□□ -1.43
TFB4YPR056W BUD5P25300 642 aaPredicted RBP6.13□□□□□ -1.43
TFB4YPR056W TY2A-CP25383 438 aa6.13□□□□□ -1.43
TFB4YPR056W HSP104P31539 908 aaKnown RBP6.13□□□□□ -1.43
TFB4YPR056W SEF1P34228 1148 aa6.13□□□□□ -1.43
TFB4YPR056W LRO1P40345 661 aa6.13□□□□□ -1.43
TFB4YPR056W DOT5P40553 215 aa6.13□□□□□ -1.43
TFB4YPR056W CAK1P43568 368 aaPredicted RBP6.13□□□□□ -1.43
TFB4YPR056W YGR111WP53265 400 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-DR2Q03483 438 aa6.13□□□□□ -1.43
TFB4YPR056W YLR413WQ06689 675 aa6.13□□□□□ -1.43
TFB4YPR056W SWT1Q12104 458 aa6.13□□□□□ -1.43
TFB4YPR056W LYS21Q12122 440 aaKnown RBP6.13□□□□□ -1.43
TFB4YPR056W BUG1Q12191 341 aa6.13□□□□□ -1.43
TFB4YPR056W HOS1Q12214 470 aa6.13□□□□□ -1.43
TFB4YPR056W UBX3Q12229 455 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-BQ12260 438 aa6.13□□□□□ -1.43
TFB4YPR056W RBD2Q12270 262 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-OR2Q12293 438 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-DR1Q12392 438 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-OR1Q12439 438 aa6.13□□□□□ -1.43
TFB4YPR056W TY2A-DR3Q99303 438 aa6.13□□□□□ -1.43
TFB4YPR056W CAR2P07991 424 aaKnown RBP6.12□□□□□ -1.43
TFB4YPR056W KSS1P14681 368 aa6.12□□□□□ -1.43
TFB4YPR056W MSN4P33749 630 aa6.12□□□□□ -1.43
TFB4YPR056W PHO11P35842 467 aa6.12□□□□□ -1.43
TFB4YPR056W PHO12P38693 467 aa6.12□□□□□ -1.43
TFB4YPR056W YHR078WP38799 552 aa6.12□□□□□ -1.43
TFB4YPR056W UTP18P40362 594 aaPredicted RBP6.12□□□□□ -1.43
TFB4YPR056W VMA13P41807 478 aaKnown RBP6.12□□□□□ -1.43
TFB4YPR056W AQR1P53943 586 aa6.12□□□□□ -1.43
TFB4YPR056W YPS7Q06325 596 aa6.12□□□□□ -1.43
TFB4YPR056W DCI1Q08558 271 aa6.12□□□□□ -1.43
TFB4YPR056W TAF3Q12297 353 aa6.12□□□□□ -1.43
TFB4YPR056W URA3P03962 267 aa6.11□□□□□ -1.43
TFB4YPR056W PPR1P07272 904 aaPredicted RBP6.11□□□□□ -1.43
TFB4YPR056W UNG1P12887 359 aa6.11□□□□□ -1.43
TFB4YPR056W CLC1P17891 233 aa6.11□□□□□ -1.43
TFB4YPR056W ERG6P25087 383 aaKnown RBP6.11□□□□□ -1.43
TFB4YPR056W COT1P32798 439 aa6.11□□□□□ -1.43
TFB4YPR056W GLG1P36143 616 aa6.11□□□□□ -1.43
TFB4YPR056W KTR3P38130 404 aaPredicted RBP6.11□□□□□ -1.43
TFB4YPR056W GDT1P38301 280 aaPredicted RBP6.11□□□□□ -1.43
TFB4YPR056W NTC20P38302 140 aaPredicted RBP6.11□□□□□ -1.43
TFB4YPR056W RRT2P38332 387 aa6.11□□□□□ -1.43
TFB4YPR056W LIN1P38852 340 aaPredicted RBP6.11□□□□□ -1.43
TFB4YPR056W ASG1P40467 964 aa6.11□□□□□ -1.43
TFB4YPR056W BUD8P41698 603 aa6.11□□□□□ -1.43
TFB4YPR056W AAD10P47182 288 aa6.11□□□□□ -1.43
TFB4YPR056W YGL242CP53066 181 aa6.11□□□□□ -1.43
TFB4YPR056W DSL1P53847 754 aa6.11□□□□□ -1.43
TFB4YPR056W ATG21Q02887 496 aa6.11□□□□□ -1.43
TFB4YPR056W HBT1Q07653 1046 aaKnown RBP6.11□□□□□ -1.43
TFB4YPR056W LEU9Q12166 604 aaKnown RBP6.11□□□□□ -1.43
TFB4YPR056W MRPL23Q12487 163 aaPredicted RBP6.11□□□□□ -1.43
TFB4YPR056W YJR112W-AQ3E743 109 aa6.11□□□□□ -1.43
TFB4YPR056W IKI3Q06706 1349 aaKnown RBP6.1□□□□□ -1.43
TFB4YPR056W DFR1P07807 211 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
TFB4YPR056W CAF20P12962 161 aaKnown RBP6.1□□□□□ -1.43
TFB4YPR056W TAL1P15019 335 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms