RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W RHO5P53879 331 aaKnown RBP6.72□□□□□ -1.33
CIT3YPR001W RIA1P53893 1110 aa6.72□□□□□ -1.33
CIT3YPR001W BOP3P53958 396 aa6.72□□□□□ -1.33
CIT3YPR001W VTC3Q02725 835 aa6.72□□□□□ -1.33
CIT3YPR001W MCP2Q06567 569 aa6.72□□□□□ -1.33
CIT3YPR001W ATG23Q06671 453 aa6.72□□□□□ -1.33
CIT3YPR001W SWM1Q12379 170 aa6.72□□□□□ -1.33
CIT3YPR001W YIL002W-AQ3E7Z5 69 aa6.72□□□□□ -1.33
CIT3YPR001W GAL7P08431 366 aa6.71□□□□□ -1.34
CIT3YPR001W LPD1P09624 499 aaKnown RBP6.71□□□□□ -1.34
CIT3YPR001W BUD5P25300 642 aaPredicted RBP6.71□□□□□ -1.34
CIT3YPR001W YCR061WP25639 631 aa6.71□□□□□ -1.34
CIT3YPR001W NTH1P32356 751 aa6.71□□□□□ -1.34
CIT3YPR001W SPC110P32380 944 aa6.71□□□□□ -1.34
CIT3YPR001W STE14P32584 239 aa6.71□□□□□ -1.34
CIT3YPR001W DSS4P32601 143 aa6.71□□□□□ -1.34
CIT3YPR001W MRE11P32829 692 aa6.71□□□□□ -1.34
CIT3YPR001W YME2P32843 850 aa6.71□□□□□ -1.34
CIT3YPR001W WBP1P33767 430 aaKnown RBP6.71□□□□□ -1.34
CIT3YPR001W MMM1P41800 426 aa6.71□□□□□ -1.34
CIT3YPR001W YNL144CP53907 740 aa6.71□□□□□ -1.34
CIT3YPR001W INA17Q02888 182 aa6.71□□□□□ -1.34
CIT3YPR001W ARV1Q06541 321 aa6.71□□□□□ -1.34
CIT3YPR001W YDR061WQ12298 539 aa6.71□□□□□ -1.34
CIT3YPR001W HRP1Q99383 534 aaKnown RBP6.71□□□□□ -1.34
CIT3YPR001W TAL1P15019 335 aaKnown RBP6.7□□□□□ -1.34
CIT3YPR001W PRE10P21242 288 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
CIT3YPR001W VPS34P22543 875 aa6.7□□□□□ -1.34
CIT3YPR001W AFG1P32317 509 aa6.7□□□□□ -1.34
CIT3YPR001W HXT3P32466 567 aaKnown RBP6.7□□□□□ -1.34
CIT3YPR001W PDB1P32473 366 aaKnown RBP6.7□□□□□ -1.34
CIT3YPR001W HCS1P34243 683 aa6.7□□□□□ -1.34
CIT3YPR001W TCD2P36101 447 aaKnown RBP6.7□□□□□ -1.34
CIT3YPR001W CCL1P37366 393 aa6.7□□□□□ -1.34
CIT3YPR001W MSS4P38994 779 aa6.7□□□□□ -1.34
CIT3YPR001W URM1P40554 99 aaPredicted RBP6.7□□□□□ -1.34
CIT3YPR001W NCS6P53088 359 aa6.7□□□□□ -1.34
CIT3YPR001W AQR1P53943 586 aa6.7□□□□□ -1.34
CIT3YPR001W CRF1Q04930 467 aa6.7□□□□□ -1.34
CIT3YPR001W KAP95Q06142 861 aaKnown RBP6.7□□□□□ -1.34
CIT3YPR001W ARR3Q06598 404 aa6.7□□□□□ -1.34
CIT3YPR001W VPS54Q12071 889 aa6.7□□□□□ -1.34
CIT3YPR001W NBL1Q3E7Y6 73 aa6.7□□□□□ -1.34
CIT3YPR001W YML133CQ03099 1374 aa6.69□□□□□ -1.34
CIT3YPR001W YLL067CQ07888 1374 aa6.69□□□□□ -1.34
CIT3YPR001W YLL066CQ99208 1374 aa6.69□□□□□ -1.34
CIT3YPR001W HIP1P06775 603 aa6.69□□□□□ -1.34
CIT3YPR001W TUB3P09734 445 aaKnown RBP6.69□□□□□ -1.34
CIT3YPR001W YML003WP0CF16 290 aa6.69□□□□□ -1.34
CIT3YPR001W ARO3P14843 370 aaKnown RBP6.69□□□□□ -1.34
CIT3YPR001W RML2P32611 393 aa6.69□□□□□ -1.34
CIT3YPR001W WHI3P34761 661 aaKnown RBP6.69□□□□□ -1.34
CIT3YPR001W YHL017WP38745 532 aa6.69□□□□□ -1.34
CIT3YPR001W YNG2P38806 282 aaKnown RBP6.69□□□□□ -1.34
CIT3YPR001W GET2P40056 285 aa6.69□□□□□ -1.34
CIT3YPR001W YTA12P40341 825 aa6.69□□□□□ -1.34
CIT3YPR001W SMC3P47037 1230 aa6.69□□□□□ -1.34
CIT3YPR001W YDR444WQ04093 687 aa6.69□□□□□ -1.34
CIT3YPR001W MRPL1Q04599 285 aa6.69□□□□□ -1.34
CIT3YPR001W RBS1Q05672 457 aaKnown RBP6.69□□□□□ -1.34
CIT3YPR001W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
CIT3YPR001W FMP40Q08968 688 aaPredicted RBP6.69□□□□□ -1.34
CIT3YPR001W VMA16P23968 213 aa6.68□□□□□ -1.34
CIT3YPR001W CRM1P30822 1084 aaKnown RBP6.68□□□□□ -1.34
CIT3YPR001W ABZ2Q03266 374 aa6.68□□□□□ -1.34
CIT3YPR001W MSC3Q05812 728 aa6.68□□□□□ -1.34
CIT3YPR001W YLR278CQ05854 1341 aa6.68□□□□□ -1.34
CIT3YPR001W GCD1P09032 578 aaPredicted RBP6.67□□□□□ -1.34
CIT3YPR001W PDA1P16387 420 aaKnown RBP6.67□□□□□ -1.34
CIT3YPR001W PEX1P24004 1043 aa6.67□□□□□ -1.34
CIT3YPR001W YCR015CP25616 317 aa6.67□□□□□ -1.34
CIT3YPR001W TOS1P38288 455 aa6.67□□□□□ -1.34
CIT3YPR001W SEC31P38968 1273 aaKnown RBP6.67□□□□□ -1.34
CIT3YPR001W PEX7P39108 375 aa6.67□□□□□ -1.34
CIT3YPR001W IMD4P50094 524 aaKnown RBP6.67□□□□□ -1.34
CIT3YPR001W LSB1P53281 241 aa6.67□□□□□ -1.34
CIT3YPR001W LSC1P53598 329 aaKnown RBP6.67□□□□□ -1.34
CIT3YPR001W TEX1P53851 422 aaKnown RBP6.67□□□□□ -1.34
CIT3YPR001W FIN1Q03898 291 aa6.67□□□□□ -1.34
CIT3YPR001W RPN9Q04062 393 aaKnown RBP6.67□□□□□ -1.34
CIT3YPR001W ECM18Q04623 453 aa6.67□□□□□ -1.34
CIT3YPR001W YFT2Q06676 274 aa6.67□□□□□ -1.34
CIT3YPR001W RRT8Q08219 342 aa6.67□□□□□ -1.34
CIT3YPR001W GPN2Q08726 347 aaPredicted RBP6.67□□□□□ -1.34
CIT3YPR001W TMN3P40071 706 aa6.66□□□□□ -1.34
CIT3YPR001W ALG5P40350 334 aa6.66□□□□□ -1.34
CIT3YPR001W YNL143CP53908 130 aa6.66□□□□□ -1.34
CIT3YPR001W NRG1Q03125 231 aa6.66□□□□□ -1.34
CIT3YPR001W RPC11Q04307 110 aaPredicted RBP6.66□□□□□ -1.34
CIT3YPR001W RLM1Q12224 676 aa6.66□□□□□ -1.34
CIT3YPR001W PRS5Q12265 496 aaKnown RBP6.66□□□□□ -1.34
CIT3YPR001W YJU2P28320 278 aaPredicted RBP6.66□□□□□ -1.34
CIT3YPR001W SFA1P32771 386 aa6.66□□□□□ -1.34
CIT3YPR001W MRP4P32902 394 aa6.66□□□□□ -1.34
CIT3YPR001W MRPL4P36517 319 aa6.66□□□□□ -1.34
CIT3YPR001W YIL077CP40508 320 aa6.66□□□□□ -1.34
CIT3YPR001W IRC8P47046 822 aa6.66□□□□□ -1.34
CIT3YPR001W YGR149WP48236 432 aa6.66□□□□□ -1.34
CIT3YPR001W FMS1P50264 508 aa6.66□□□□□ -1.34
CIT3YPR001W CTK1Q03957 528 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms