RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W HOC1P47124 396 aa2.22□□□□□ -2.05
SEC16YPL085W SDT1P53078 280 aa2.22□□□□□ -2.05
SEC16YPL085W BUD22Q04347 519 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W YPL272CQ08984 517 aa2.22□□□□□ -2.05
SEC16YPL085W TRM8Q12009 286 aa2.22□□□□□ -2.05
SEC16YPL085W POX1P13711 748 aa2.22□□□□□ -2.05
SEC16YPL085W YSP3P25036 478 aa2.22□□□□□ -2.05
SEC16YPL085W DAL1P32375 460 aa2.22□□□□□ -2.05
SEC16YPL085W SPS19P32573 292 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W PXA2P34230 853 aa2.22□□□□□ -2.05
SEC16YPL085W APD1P38281 316 aa2.22□□□□□ -2.05
SEC16YPL085W ARN1P38731 627 aa2.22□□□□□ -2.05
SEC16YPL085W EGD2P38879 174 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W PRM5P40476 318 aa2.22□□□□□ -2.05
SEC16YPL085W LSG1P53145 640 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W MFG1Q07684 458 aa2.22□□□□□ -2.05
SEC16YPL085W ULA1Q12059 462 aa2.22□□□□□ -2.05
SEC16YPL085W VPS54Q12071 889 aa2.22□□□□□ -2.05
SEC16YPL085W YDR061WQ12298 539 aa2.22□□□□□ -2.05
SEC16YPL085W ZPS1Q12512 249 aa2.22□□□□□ -2.05
SEC16YPL085W TPK1P06244 397 aa2.22□□□□□ -2.05
SEC16YPL085W BCY1P07278 416 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W HCM1P25364 564 aa2.22□□□□□ -2.05
SEC16YPL085W MTC2P34246 357 aa2.22□□□□□ -2.05
SEC16YPL085W MAE1P36013 669 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W SRP72P38688 640 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W CTK3P46963 296 aaPredicted RBP2.22□□□□□ -2.05
SEC16YPL085W UPF3P48412 387 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W NBP1P52919 319 aaPredicted RBP2.22□□□□□ -2.05
SEC16YPL085W UTP8P53276 713 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W TRM44Q02648 567 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W ULP1Q02724 621 aa2.22□□□□□ -2.05
SEC16YPL085W GAL83Q04739 417 aa2.22□□□□□ -2.05
SEC16YPL085W ESA1Q08649 445 aa2.22□□□□□ -2.05
SEC16YPL085W TOP3P13099 656 aa2.22□□□□□ -2.05
SEC16YPL085W FPR1P20081 114 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W BAS1P22035 811 aa2.22□□□□□ -2.05
SEC16YPL085W CHL1P22516 861 aaPredicted RBP2.22□□□□□ -2.05
SEC16YPL085W FAA1P30624 700 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W SFA1P32771 386 aa2.22□□□□□ -2.05
SEC16YPL085W YET1P35723 206 aa2.22□□□□□ -2.05
SEC16YPL085W YBR063CP38083 404 aa2.22□□□□□ -2.05
SEC16YPL085W YBR284WP38150 797 aa2.22□□□□□ -2.05
SEC16YPL085W END3P39013 349 aa2.22□□□□□ -2.05
SEC16YPL085W PRP39P39682 629 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W ECM1P39715 212 aa2.22□□□□□ -2.05
SEC16YPL085W RGI2P40188 164 aa2.22□□□□□ -2.05
SEC16YPL085W MNT3P40549 630 aa2.22□□□□□ -2.05
SEC16YPL085W IDP2P41939 412 aa2.22□□□□□ -2.05
SEC16YPL085W CLA4P48562 842 aa2.22□□□□□ -2.05
SEC16YPL085W ASN1P49089 572 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W YGL101WP53144 215 aa2.22□□□□□ -2.05
SEC16YPL085W GTR2P53290 341 aa2.22□□□□□ -2.05
SEC16YPL085W PGA2P53903 129 aa2.22□□□□□ -2.05
SEC16YPL085W MRPL13Q02204 264 aa2.22□□□□□ -2.05
SEC16YPL085W TBF1Q02457 562 aa2.22□□□□□ -2.05
SEC16YPL085W YDR476CQ03362 224 aa2.22□□□□□ -2.05
SEC16YPL085W YMR265CQ03508 461 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W YMR226CQ05016 267 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W VPS68Q12016 184 aa2.22□□□□□ -2.05
SEC16YPL085W AIM41Q12032 185 aa2.22□□□□□ -2.05
SEC16YPL085W FAL1Q12099 399 aaKnown RBP2.22□□□□□ -2.05
SEC16YPL085W NBP2Q12163 236 aa2.22□□□□□ -2.05
SEC16YPL085W HER1Q12276 1246 aa2.22□□□□□ -2.05
SEC16YPL085W LSO1Q3E827 93 aa2.22□□□□□ -2.05
SEC16YPL085W CDC31P06704 161 aaKnown RBP2.21□□□□□ -2.05
SEC16YPL085W TRM1P15565 570 aaKnown RBP2.21□□□□□ -2.05
SEC16YPL085W COQ8P27697 501 aa2.21□□□□□ -2.05
SEC16YPL085W MBA1P38300 278 aa2.21□□□□□ -2.05
SEC16YPL085W TSC10P38342 320 aa2.21□□□□□ -2.05
SEC16YPL085W YHL050CP38721 697 aa2.21□□□□□ -2.05
SEC16YPL085W CYC2P38909 366 aa2.21□□□□□ -2.05
SEC16YPL085W RBG1P39729 369 aa2.21□□□□□ -2.05
SEC16YPL085W NDE1P40215 560 aa2.21□□□□□ -2.05
SEC16YPL085W GUS1P46655 708 aaKnown RBP RIP-Chip data2.21□□□□□ -2.05not detected
SEC16YPL085W NMD5P46970 1048 aa2.21□□□□□ -2.05
SEC16YPL085W HXT17P53631 564 aa2.21□□□□□ -2.05
SEC16YPL085W ARC35P53731 342 aaKnown RBP2.21□□□□□ -2.05
SEC16YPL085W GTR1Q00582 310 aa2.21□□□□□ -2.05
SEC16YPL085W APM1Q00776 475 aaPredicted RBP2.21□□□□□ -2.05
SEC16YPL085W IRC13Q08630 104 aa2.21□□□□□ -2.05
SEC16YPL085W TSR3Q12094 313 aaKnown RBP2.21□□□□□ -2.05
SEC16YPL085W PRM4Q12498 284 aa2.21□□□□□ -2.05
SEC16YPL085W IZH4Q99393 312 aa2.21□□□□□ -2.05
SEC16YPL085W RPS4AP0CX35 261 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W RPS4BP0CX36 261 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W HMG1P12683 1054 aa2.21□□□□□ -2.06
SEC16YPL085W GLN3P18494 730 aa2.21□□□□□ -2.06
SEC16YPL085W PMI40P29952 429 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W KRE6P32486 720 aa2.21□□□□□ -2.06
SEC16YPL085W ISC10P32645 267 aa2.21□□□□□ -2.06
SEC16YPL085W SPL2P38839 148 aa2.21□□□□□ -2.06
SEC16YPL085W EXO1P39875 702 aa2.21□□□□□ -2.06
SEC16YPL085W LOC1P43586 204 aaPredicted RBP2.21□□□□□ -2.06
SEC16YPL085W APS3P47064 194 aa2.21□□□□□ -2.06
SEC16YPL085W YOL029CQ08187 201 aa2.21□□□□□ -2.06
SEC16YPL085W WSC3Q12215 556 aa2.21□□□□□ -2.06
SEC16YPL085W ABF1P14164 731 aa2.21□□□□□ -2.06
SEC16YPL085W TRX1P22217 103 aaKnown RBP2.21□□□□□ -2.06
SEC16YPL085W SCJ1P25303 377 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms