RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W CCT7P42943 550 aaKnown RBP3.99□□□□□ -1.77
VPS27YNR006W DLD2P46681 530 aaKnown RBP3.99□□□□□ -1.77
VPS27YNR006W USA1Q03714 838 aa3.99□□□□□ -1.77
VPS27YNR006W HEL2Q05580 639 aaKnown RBP3.99□□□□□ -1.77
VPS27YNR006W YLH47Q06493 454 aa3.99□□□□□ -1.77
VPS27YNR006W DIA2Q08496 732 aaPredicted RBP3.99□□□□□ -1.77
VPS27YNR006W CHS5Q12114 671 aaKnown RBP3.99□□□□□ -1.77
VPS27YNR006W GAL80P04387 435 aa3.98□□□□□ -1.77
VPS27YNR006W TPK2P06245 380 aa3.98□□□□□ -1.77
VPS27YNR006W SEC15P22224 910 aa3.98□□□□□ -1.77
VPS27YNR006W STE11P23561 717 aa3.98□□□□□ -1.77
VPS27YNR006W YIH1P25637 258 aa3.98□□□□□ -1.77
VPS27YNR006W SEC66P33754 206 aa3.98□□□□□ -1.77
VPS27YNR006W CMC1P36064 111 aa3.98□□□□□ -1.77
VPS27YNR006W OTU2P38747 307 aaKnown RBP3.98□□□□□ -1.77
VPS27YNR006W ERC1P38767 581 aa3.98□□□□□ -1.77
VPS27YNR006W BAP3P41815 604 aa3.98□□□□□ -1.77
VPS27YNR006W ALT2P52892 507 aa3.98□□□□□ -1.77
VPS27YNR006W YDR239CQ03780 787 aa3.98□□□□□ -1.77
VPS27YNR006W SPH1Q06160 661 aa3.98□□□□□ -1.77
VPS27YNR006W PHO92Q06390 306 aa3.98□□□□□ -1.77
VPS27YNR006W YBR085C-AO43137 85 aa3.98□□□□□ -1.77
VPS27YNR006W YML002WP0CF17 737 aa3.98□□□□□ -1.77
VPS27YNR006W DBP3P20447 523 aaKnown RBP3.98□□□□□ -1.77
VPS27YNR006W PRP28P23394 588 aa3.98□□□□□ -1.77
VPS27YNR006W PHO84P25297 587 aaKnown RBP3.98□□□□□ -1.77
VPS27YNR006W PDB1P32473 366 aaKnown RBP3.98□□□□□ -1.77
VPS27YNR006W ELM1P32801 640 aa3.98□□□□□ -1.77
VPS27YNR006W MRE11P32829 692 aa3.98□□□□□ -1.77
VPS27YNR006W LTV1P34078 463 aa3.98□□□□□ -1.77
VPS27YNR006W SEF1P34228 1148 aa3.98□□□□□ -1.77
VPS27YNR006W MNN2P38069 597 aa3.98□□□□□ -1.77
VPS27YNR006W ARO9P38840 513 aaPredicted RBP3.98□□□□□ -1.77
VPS27YNR006W FMO1P38866 432 aa3.98□□□□□ -1.77
VPS27YNR006W NUP60P39705 539 aa3.98□□□□□ -1.77
VPS27YNR006W FKH2P41813 862 aa3.98□□□□□ -1.77
VPS27YNR006W CTR1P49573 406 aa3.98□□□□□ -1.77
VPS27YNR006W TWF1P53250 332 aa3.98□□□□□ -1.77
VPS27YNR006W YGR111WP53265 400 aa3.98□□□□□ -1.77
VPS27YNR006W PDR16P53860 351 aaKnown RBP3.98□□□□□ -1.77
VPS27YNR006W KAP120Q02932 1032 aa3.98□□□□□ -1.77
VPS27YNR006W CTK1Q03957 528 aaKnown RBP3.98□□□□□ -1.77
VPS27YNR006W MGR3Q04472 501 aa3.98□□□□□ -1.77
VPS27YNR006W SWA2Q06677 668 aa3.98□□□□□ -1.77
VPS27YNR006W UAF30Q08747 228 aa3.98□□□□□ -1.77
VPS27YNR006W MDY2Q12285 212 aa3.98□□□□□ -1.77
VPS27YNR006W AVL9Q12500 764 aa3.98□□□□□ -1.77
VPS27YNR006W YLR358CO13565 187 aa3.97□□□□□ -1.77
VPS27YNR006W EST1P17214 699 aaPredicted RBP3.97□□□□□ -1.77
VPS27YNR006W YSP3P25036 478 aa3.97□□□□□ -1.77
VPS27YNR006W RFA2P26754 273 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W HXT3P32466 567 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W NIP1P32497 812 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W TCD2P36101 447 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W MRPL7P36519 292 aa3.97□□□□□ -1.77
VPS27YNR006W REV7P38927 245 aa3.97□□□□□ -1.77
VPS27YNR006W SEC27P41811 889 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W SWP82P43554 623 aa3.97□□□□□ -1.77
VPS27YNR006W AVT1P47082 602 aa3.97□□□□□ -1.77
VPS27YNR006W BUL1P48524 976 aa3.97□□□□□ -1.77
VPS27YNR006W MNN10P50108 393 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W MCM6P53091 1017 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W STR3P53101 465 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W FHN1P53279 174 aa3.97□□□□□ -1.77
VPS27YNR006W RAD33Q04231 177 aa3.97□□□□□ -1.77
VPS27YNR006W RNH1Q04740 348 aa3.97□□□□□ -1.77
VPS27YNR006W ATG23Q06671 453 aa3.97□□□□□ -1.77
VPS27YNR006W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
VPS27YNR006W LEU9Q12166 604 aaKnown RBP3.97□□□□□ -1.77
VPS27YNR006W YBR255C-AQ3E776 120 aa3.97□□□□□ -1.77
VPS27YNR006W YMR084WA2P2R3 262 aa3.96□□□□□ -1.77
VPS27YNR006W OM45P16547 393 aa3.96□□□□□ -1.77
VPS27YNR006W DAL80P26343 269 aa3.96□□□□□ -1.77
VPS27YNR006W IME2P32581 645 aa3.96□□□□□ -1.77
VPS27YNR006W TIF3P34167 436 aaKnown RBP3.96□□□□□ -1.77
VPS27YNR006W YNG2P38806 282 aaKnown RBP3.96□□□□□ -1.77
VPS27YNR006W MTG2P38860 518 aa3.96□□□□□ -1.77
VPS27YNR006W HXT14P42833 540 aa3.96□□□□□ -1.77
VPS27YNR006W YGR079WP53249 370 aa3.96□□□□□ -1.77
VPS27YNR006W NOP6Q07623 225 aaKnown RBP3.96□□□□□ -1.77
VPS27YNR006W FRE5Q08908 694 aa3.96□□□□□ -1.77
VPS27YNR006W RLM1Q12224 676 aa3.96□□□□□ -1.77
VPS27YNR006W TRP4P07285 380 aaPredicted RBP3.96□□□□□ -1.78
VPS27YNR006W SPC110P32380 944 aa3.96□□□□□ -1.78
VPS27YNR006W RML2P32611 393 aa3.96□□□□□ -1.78
VPS27YNR006W LOT5P34234 306 aa3.96□□□□□ -1.78
VPS27YNR006W SDH8P38345 138 aa3.96□□□□□ -1.78
VPS27YNR006W SER3P40054 469 aa3.96□□□□□ -1.78
VPS27YNR006W GCD10P41814 478 aa3.96□□□□□ -1.78
VPS27YNR006W STU2P46675 888 aa3.96□□□□□ -1.78
VPS27YNR006W AIP1P46680 615 aaKnown RBP3.96□□□□□ -1.78
VPS27YNR006W IMD4P50094 524 aaKnown RBP3.96□□□□□ -1.78
VPS27YNR006W SPC98P53540 846 aa3.96□□□□□ -1.78
VPS27YNR006W BOP3P53958 396 aa3.96□□□□□ -1.78
VPS27YNR006W BUD22Q04347 519 aaKnown RBP3.96□□□□□ -1.78
VPS27YNR006W RBA50Q04418 439 aa3.96□□□□□ -1.78
VPS27YNR006W IZH3Q07959 543 aa3.96□□□□□ -1.78
VPS27YNR006W SGT2Q12118 346 aaKnown RBP3.96□□□□□ -1.78
VPS27YNR006W HER1Q12276 1246 aa3.96□□□□□ -1.78
VPS27YNR006W LPD1P09624 499 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms