RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	CCT8	P47079	568 aa	Known RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	LIA1	P47120	325 aa	Known RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	SLI1	P53304	468 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	YNR068C	P53754	272 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	SEG1	Q04279	960 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	PLM2	Q04383	521 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	YLR407W	Q06070	228 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	GRS2	Q06817	618 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	RCL1	Q08096	367 aa	Predicted RBP	7.14	□□□□□ -1.27
MSB3	YNL293W	FRE5	Q08908	694 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	ADR1	P07248	1323 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	YOR093C	Q12275	1648 aa		7.14	□□□□□ -1.27
MSB3	YNL293W	TDH1	P00360	332 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	RAD10	P06838	210 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	PPR1	P07272	904 aa	Predicted RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	GRX2	P17695	143 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	CIN8	P27895	1000 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	CAM1	P29547	415 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	EAP1	P36041	632 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	SCO2	P38072	301 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	PDX3	P38075	228 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	YBP1	P38315	674 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	YAP1801	P38856	637 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	YDR089W	P38966	869 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	SAH1	P39954	449 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	PKP1	P40530	394 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	PSA1	P41940	361 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	HSH155	P49955	971 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	PIP2	P52960	996 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	CUL3	P53202	744 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	SEN54	Q02825	467 aa	Predicted RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	SCS7	Q03529	384 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	RUB1	Q03919	77 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	PDR8	Q06149	701 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	DIB1	Q06819	143 aa	Predicted RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	IWR1	Q07532	353 aa	Predicted RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	ESC8	Q08119	714 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	DDC1	Q08949	612 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	FMP40	Q08968	688 aa	Predicted RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	PSF3	Q12146	194 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	VMR1	P38735	1592 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	INH1	P01097	85 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	GCN4	P03069	281 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	PMA1	P05030	918 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	CHS1	P08004	1131 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	HRR25	P29295	494 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	CDC12	P32468	407 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	SUL1	P38359	859 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	SPC97	P38863	823 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	CEM1	P39525	442 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	UBP9	P39967	754 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	PSY2	P40164	858 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	MAM33	P40513	266 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	NEO1	P40527	1151 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	ZIM17	P42844	174 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	LOC1	P43586	204 aa	Predicted RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	ASE1	P50275	885 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	FMN1	Q03778	218 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	ULA1	Q12059	462 aa		7.13	□□□□□ -1.27
MSB3	YNL293W	RPN5	Q12250	445 aa	Known RBP	7.13	□□□□□ -1.27
MSB3	YNL293W	CET1	O13297	549 aa	Predicted RBP	7.12	□□□□□ -1.27
MSB3	YNL293W	NFT1	P0CE68	1218 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	MAS1	P10507	462 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	PUT4	P15380	627 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	AAC3	P18238	307 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	SAR1	P20606	190 aa	Known RBP	7.12	□□□□□ -1.27
MSB3	YNL293W	RAM1	P22007	431 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	CHL1	P22516	861 aa	Predicted RBP	7.12	□□□□□ -1.27
MSB3	YNL293W	VPS34	P22543	875 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	SAC1	P32368	623 aa	Known RBP	7.12	□□□□□ -1.27
MSB3	YNL293W	LEU5	P38702	357 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	PAN5	P38787	379 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	TPA1	P40032	644 aa	Known RBP	7.12	□□□□□ -1.27
MSB3	YNL293W	TOK1	P40310	691 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	TAF4	P50105	388 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	EAR1	Q03212	550 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	GLO4	Q12320	285 aa		7.12	□□□□□ -1.27
MSB3	YNL293W	DNF3	Q12674	1656 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	FUS3	P16892	353 aa	Known RBP	7.11	□□□□□ -1.27
MSB3	YNL293W	SBA1	P28707	216 aa	Known RBP	7.11	□□□□□ -1.27
MSB3	YNL293W	FBP26	P32604	452 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	MGM101	P32787	269 aa	Known RBP	7.11	□□□□□ -1.27
MSB3	YNL293W	MRP4	P32902	394 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	GIC1	P38785	314 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	7.11	□□□□□ -1.27	not detected
MSB3	YNL293W	MNN1	P39106	762 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	PRM9	P39551	298 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	EXO1	P39875	702 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	GTO1	P48239	356 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	RCF2	P53721	224 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	EBS1	Q03466	884 aa	Known RBP	7.11	□□□□□ -1.27
MSB3	YNL293W	RTN1	Q04947	295 aa	Known RBP	7.11	□□□□□ -1.27
MSB3	YNL293W	RQC1	Q05468	723 aa	Known RBP	7.11	□□□□□ -1.27
MSB3	YNL293W	FAR10	Q06001	478 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	BCP1	Q06338	283 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	YPR084W	Q06821	456 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	YNG1	Q08465	219 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	FLC1	Q08967	793 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	LDB17	Q12342	491 aa		7.11	□□□□□ -1.27
MSB3	YNL293W	CAR2	P07991	424 aa	Known RBP	7.11	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms