RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W BNI4P53858 892 aa5.93□□□□□ -1.46
ATG4YNL223W LEE1Q02799 301 aaKnown RBP5.93□□□□□ -1.46
ATG4YNL223W GTB1Q04924 702 aa5.93□□□□□ -1.46
ATG4YNL223W SEC10Q06245 871 aa5.93□□□□□ -1.46
ATG4YNL223W CRN1Q06440 651 aa5.93□□□□□ -1.46
ATG4YNL223W ISU2Q12056 156 aa5.93□□□□□ -1.46
ATG4YNL223W MRH1Q12117 320 aaPredicted RBP5.93□□□□□ -1.46
ATG4YNL223W UBX3Q12229 455 aa5.93□□□□□ -1.46
ATG4YNL223W MDY2Q12285 212 aa5.93□□□□□ -1.46
ATG4YNL223W YPL247CQ12523 523 aa5.93□□□□□ -1.46
ATG4YNL223W ABF1P14164 731 aa5.92□□□□□ -1.46
ATG4YNL223W SIR1P21691 654 aa5.92□□□□□ -1.46
ATG4YNL223W VAN1P23642 535 aa5.92□□□□□ -1.46
ATG4YNL223W YCR090CP25654 182 aaKnown RBP5.92□□□□□ -1.46
ATG4YNL223W RAD14P28519 371 aa5.92□□□□□ -1.46
ATG4YNL223W LDB7P38210 180 aa5.92□□□□□ -1.46
ATG4YNL223W TSC10P38342 320 aa5.92□□□□□ -1.46
ATG4YNL223W PRM2P40534 656 aa5.92□□□□□ -1.46
ATG4YNL223W YIR007WP40566 764 aa5.92□□□□□ -1.46
ATG4YNL223W AIM23P47015 356 aa5.92□□□□□ -1.46
ATG4YNL223W TUB4P53378 473 aa5.92□□□□□ -1.46
ATG4YNL223W ORC3P54790 616 aa5.92□□□□□ -1.46
ATG4YNL223W GSF2Q04697 403 aaKnown RBP5.92□□□□□ -1.46
ATG4YNL223W BLS1Q06071 122 aa5.92□□□□□ -1.46
ATG4YNL223W HDA3Q06623 655 aa5.92□□□□□ -1.46
ATG4YNL223W FRT1Q99332 602 aa5.92□□□□□ -1.46
ATG4YNL223W SEC53P07283 254 aaKnown RBP5.91□□□□□ -1.46
ATG4YNL223W SPS1P08458 490 aa5.91□□□□□ -1.46
ATG4YNL223W PWP1P21304 576 aaKnown RBP5.91□□□□□ -1.46
ATG4YNL223W SEC15P22224 910 aa5.91□□□□□ -1.46
ATG4YNL223W MNE1P24720 663 aa5.91□□□□□ -1.46
ATG4YNL223W MF(ALPHA)2P32435 120 aa5.91□□□□□ -1.46
ATG4YNL223W SSE1P32589 693 aaKnown RBP5.91□□□□□ -1.46
ATG4YNL223W PTM1P32857 523 aa5.91□□□□□ -1.46
ATG4YNL223W LIP5P32875 414 aa5.91□□□□□ -1.46
ATG4YNL223W TYE7P33122 291 aaPredicted RBP5.91□□□□□ -1.46
ATG4YNL223W PHO11P35842 467 aa5.91□□□□□ -1.46
ATG4YNL223W FZO1P38297 855 aa5.91□□□□□ -1.46
ATG4YNL223W PHO12P38693 467 aa5.91□□□□□ -1.46
ATG4YNL223W BZZ1P38822 633 aa5.91□□□□□ -1.46
ATG4YNL223W SHU2P38957 223 aa5.91□□□□□ -1.46
ATG4YNL223W DUN1P39009 513 aa5.91□□□□□ -1.46
ATG4YNL223W FRT2P39734 528 aa5.91□□□□□ -1.46
ATG4YNL223W GCD14P46959 383 aaPredicted RBP5.91□□□□□ -1.46
ATG4YNL223W PET130P47065 347 aa5.91□□□□□ -1.46
ATG4YNL223W PRM1P53835 661 aa5.91□□□□□ -1.46
ATG4YNL223W SLM2P53955 656 aa5.91□□□□□ -1.46
ATG4YNL223W RMI1Q02685 241 aa5.91□□□□□ -1.46
ATG4YNL223W LGE1Q02796 332 aaKnown RBP5.91□□□□□ -1.46
ATG4YNL223W SPO20Q04359 397 aa5.91□□□□□ -1.46
ATG4YNL223W TMN2Q04562 672 aa5.91□□□□□ -1.46
ATG4YNL223W YPR114WQ06107 315 aa5.91□□□□□ -1.46
ATG4YNL223W NUT2Q06213 157 aa5.91□□□□□ -1.46
ATG4YNL223W DIA2Q08496 732 aaPredicted RBP5.91□□□□□ -1.46
ATG4YNL223W HRK1Q08732 759 aaKnown RBP5.91□□□□□ -1.46
ATG4YNL223W GNT1Q12096 491 aa5.91□□□□□ -1.46
ATG4YNL223W RRP36Q12481 300 aaPredicted RBP5.91□□□□□ -1.46
ATG4YNL223W LEU1P07264 779 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W ARD1P07347 238 aaPredicted RBP5.9□□□□□ -1.46
ATG4YNL223W RPP1BP10622 106 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W NMT1P14743 455 aa5.9□□□□□ -1.46
ATG4YNL223W PMA2P19657 947 aa5.9□□□□□ -1.46
ATG4YNL223W PRP6P19735 899 aaPredicted RBP5.9□□□□□ -1.46
ATG4YNL223W RPB4P20433 221 aaPredicted RBP5.9□□□□□ -1.46
ATG4YNL223W KIN3P22209 435 aa5.9□□□□□ -1.46
ATG4YNL223W GFD2P25370 566 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W MRPL9P31334 269 aa5.9□□□□□ -1.46
ATG4YNL223W SPR1P32603 445 aa5.9□□□□□ -1.46
ATG4YNL223W LRG1P35688 1017 aa5.9□□□□□ -1.46
ATG4YNL223W CUE2P36075 443 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W IRS4P36115 615 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W YHL008CP38750 627 aa5.9□□□□□ -1.46
ATG4YNL223W GGA2P38817 585 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W COA1P40452 197 aa5.9□□□□□ -1.46
ATG4YNL223W GTS1P40956 396 aa5.9□□□□□ -1.46
ATG4YNL223W ERG10P41338 398 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W MIG2P53035 382 aa5.9□□□□□ -1.46
ATG4YNL223W VEL1P53058 206 aa5.9□□□□□ -1.46
ATG4YNL223W YNL143CP53908 130 aa5.9□□□□□ -1.46
ATG4YNL223W LSM3P57743 89 aaKnown RBP5.9□□□□□ -1.46
ATG4YNL223W ARP4P80428 489 aa5.9□□□□□ -1.46
ATG4YNL223W OSH6Q02201 448 aa5.9□□□□□ -1.46
ATG4YNL223W GOT1Q03554 138 aa5.9□□□□□ -1.46
ATG4YNL223W TAF12Q03761 539 aa5.9□□□□□ -1.46
ATG4YNL223W GLO2Q05584 274 aa5.9□□□□□ -1.46
ATG4YNL223W YOL019WQ08157 551 aa5.9□□□□□ -1.46
ATG4YNL223W SGO1Q08490 590 aa5.9□□□□□ -1.46
ATG4YNL223W PER33Q12144 273 aa5.9□□□□□ -1.46
ATG4YNL223W UPC2Q12151 913 aa5.9□□□□□ -1.46
ATG4YNL223W ICT1Q12385 394 aa5.9□□□□□ -1.46
ATG4YNL223W CAR1P00812 333 aaKnown RBP5.9□□□□□ -1.47
ATG4YNL223W PBS2P08018 668 aa5.9□□□□□ -1.47
ATG4YNL223W ART10P18634 518 aaKnown RBP5.9□□□□□ -1.47
ATG4YNL223W SWE1P32944 819 aa5.9□□□□□ -1.47
ATG4YNL223W RIM11P38615 370 aa5.9□□□□□ -1.47
ATG4YNL223W DOT6P40059 670 aaKnown RBP5.9□□□□□ -1.47
ATG4YNL223W VMA13P41807 478 aaKnown RBP5.9□□□□□ -1.47
ATG4YNL223W IME4P41833 600 aa5.9□□□□□ -1.47
ATG4YNL223W YJR124CP47159 448 aa5.9□□□□□ -1.47
ATG4YNL223W MNT2P53059 558 aa5.9□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms