RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	MSS51	P32335	436 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	BUR6	P40096	142 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	RGI2	P40188	164 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	RMD8	P43620	662 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	SMC3	P47037	1230 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	ORC5	P50874	479 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	YML037C	Q03703	340 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	TPO3	Q06451	622 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	IRC3	Q06683	689 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	YEH1	Q07804	573 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	ATG9	Q12142	997 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	SCM3	Q12334	223 aa		4.84	□□□□□ -1.63
CUS1	YMR240C	ARG3	P05150	338 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	ADH7	P25377	361 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	YIH1	P25637	258 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	PEP3	P27801	918 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	SNU114	P36048	1008 aa	Known RBP	4.83	□□□□□ -1.64
CUS1	YMR240C	YFR020W	P43600	232 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	RPT6	Q01939	405 aa	Known RBP	4.83	□□□□□ -1.64
CUS1	YMR240C	SNU56	Q03782	492 aa	Known RBP	4.83	□□□□□ -1.64
CUS1	YMR240C	TAF11	Q04226	346 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	YLR455W	Q06188	304 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	INP53	Q12271	1107 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	YJR112W-A	Q3E743	109 aa		4.83	□□□□□ -1.64
CUS1	YMR240C	CBS1	P14066	229 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	CKA1	P15790	372 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	PGS1	P25578	521 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	NPL6	P32832	435 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	OCT1	P35999	772 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	TPA1	P40032	644 aa	Known RBP	4.82	□□□□□ -1.64
CUS1	YMR240C	DIA3	P52290	468 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	YGR066C	P53242	292 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	BUD22	Q04347	519 aa	Known RBP	4.82	□□□□□ -1.64
CUS1	YMR240C	YLR049C	Q12110	428 aa		4.82	□□□□□ -1.64
CUS1	YMR240C	FOB1	O13329	566 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	ARD1	P07347	238 aa	Predicted RBP	4.81	□□□□□ -1.64
CUS1	YMR240C	CHO1	P08456	276 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	HOM2	P13663	365 aa	Known RBP	4.81	□□□□□ -1.64
CUS1	YMR240C	YKL050C	P35736	922 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	ARN1	P38731	627 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	CCT6	P39079	546 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	SPO22	P40511	975 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	IRC7	P43623	340 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	RPS7B	P48164	190 aa	Known RBP	4.81	□□□□□ -1.64
CUS1	YMR240C	ATP23	P53722	227 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	YLR287C	Q05881	355 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	ORM2	Q06144	216 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	PDR8	Q06149	701 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	GET3	Q12154	354 aa	Known RBP	4.81	□□□□□ -1.64
CUS1	YMR240C	YPT6	Q99260	215 aa		4.81	□□□□□ -1.64
CUS1	YMR240C	MF(ALPHA)1	P01149	165 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	YCR006C	P25350	157 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	MNN2	P38069	597 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	REG2	P38232	338 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	YJL107C	P42947	387 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	LCL3	P53153	274 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	EFM6	P53970	246 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	MAK10	Q02197	733 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	PFA5	Q03289	374 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	GIR2	Q03768	265 aa	Predicted RBP	4.8	□□□□□ -1.64
CUS1	YMR240C	UTP21	Q06078	939 aa	Predicted RBP	4.8	□□□□□ -1.64
CUS1	YMR240C	PIG1	Q06216	648 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	MCH4	Q08268	501 aa		4.8	□□□□□ -1.64
CUS1	YMR240C	HSH49	Q99181	213 aa	Predicted RBP	4.8	□□□□□ -1.64
CUS1	YMR240C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CUS1	YMR240C	GPA1	P08539	472 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	RAP1	P11938	827 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	SPE2	P21182	396 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	MBR1	P23493	339 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	STE50	P25344	346 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	SAC1	P32368	623 aa	Known RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	ORC2	P32833	620 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	MET28	P40573	187 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	VTC2	P43585	828 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	NMD5	P46970	1048 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	EAF7	P53911	425 aa	Known RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	YMR178W	Q03219	274 aa	Known RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	SYF1	Q04048	859 aa	Predicted RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	LUC7	Q07508	261 aa	Predicted RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	APL4	Q12028	832 aa		4.79	□□□□□ -1.64
CUS1	YMR240C	LEU9	Q12166	604 aa	Known RBP	4.79	□□□□□ -1.64
CUS1	YMR240C	ERG11	P10614	530 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	URE2	P23202	354 aa	Known RBP	4.78	□□□□□ -1.64
CUS1	YMR240C	TKL1	P23254	680 aa	Known RBP	4.78	□□□□□ -1.64
CUS1	YMR240C	SSE2	P32590	693 aa	Known RBP	4.78	□□□□□ -1.64
CUS1	YMR240C	PXL1	P36166	706 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	ELO1	P39540	310 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	FAR3	P46671	204 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	IRC8	P47046	822 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	VID30	P53076	958 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	ZDS2	P54786	942 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	YOL159C	Q08300	171 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	ETT1	Q08421	412 aa	Known RBP	4.78	□□□□□ -1.64
CUS1	YMR240C	BUD7	Q08754	746 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	FMP40	Q08968	688 aa	Predicted RBP	4.78	□□□□□ -1.64
CUS1	YMR240C	FRE7	Q12333	620 aa		4.78	□□□□□ -1.64
CUS1	YMR240C	YER145C-A	A0A023PYF4	145 aa		4.77	□□□□□ -1.65
CUS1	YMR240C	RED1	P14291	827 aa		4.77	□□□□□ -1.65
CUS1	YMR240C	KRS1	P15180	591 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms