RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W ARV1Q06541 321 aa5.01□□□□□ -1.61
ROT1YMR200W MCP2Q06567 569 aa5.01□□□□□ -1.61
ROT1YMR200W NUS1Q12063 375 aa5.01□□□□□ -1.61
ROT1YMR200W BNR1P40450 1375 aa5.01□□□□□ -1.61
ROT1YMR200W ATP2P00830 511 aaKnown RBP5□□□□□ -1.61
ROT1YMR200W SIR3P06701 978 aa5□□□□□ -1.61
ROT1YMR200W PET122P10355 254 aa5□□□□□ -1.61
ROT1YMR200W EST1P17214 699 aaPredicted RBP5□□□□□ -1.61
ROT1YMR200W ERG6P25087 383 aaKnown RBP5□□□□□ -1.61
ROT1YMR200W PET127P32606 800 aa5□□□□□ -1.61
ROT1YMR200W FMO1P38866 432 aa5□□□□□ -1.61
ROT1YMR200W JHD1P40034 492 aa5□□□□□ -1.61
ROT1YMR200W MRX1P40050 688 aa5□□□□□ -1.61
ROT1YMR200W VFA1P40080 203 aa5□□□□□ -1.61
ROT1YMR200W MET28P40573 187 aa5□□□□□ -1.61
ROT1YMR200W BPL1P48445 690 aaPredicted RBP5□□□□□ -1.61
ROT1YMR200W LCL3P53153 274 aa5□□□□□ -1.61
ROT1YMR200W YBP2P53169 641 aa5□□□□□ -1.61
ROT1YMR200W ARP5P53946 755 aa5□□□□□ -1.61
ROT1YMR200W DAK1P54838 584 aaKnown RBP5□□□□□ -1.61
ROT1YMR200W SMX3P54999 86 aaPredicted RBP5□□□□□ -1.61
ROT1YMR200W ARG5,6Q01217 863 aa5□□□□□ -1.61
ROT1YMR200W MAK10Q02197 733 aa5□□□□□ -1.61
ROT1YMR200W ARX1Q03862 593 aaKnown RBP5□□□□□ -1.61
ROT1YMR200W VAM6Q07468 1049 aa5□□□□□ -1.61
ROT1YMR200W NOP6Q07623 225 aaKnown RBP5□□□□□ -1.61
ROT1YMR200W RIX7Q07844 837 aaKnown RBP5□□□□□ -1.61
ROT1YMR200W TCO89Q08921 799 aa5□□□□□ -1.61
ROT1YMR200W SUL2Q12325 893 aa5□□□□□ -1.61
ROT1YMR200W ISN1Q99312 450 aa5□□□□□ -1.61
ROT1YMR200W PYC1P11154 1178 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W HMG2P12684 1045 aa4.99□□□□□ -1.61
ROT1YMR200W FRS1P15624 595 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W DBP3P20447 523 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W KIN3P22209 435 aa4.99□□□□□ -1.61
ROT1YMR200W GCD7P32502 381 aaPredicted RBP4.99□□□□□ -1.61
ROT1YMR200W MTC7P32633 139 aa4.99□□□□□ -1.61
ROT1YMR200W PEX2P32800 271 aa4.99□□□□□ -1.61
ROT1YMR200W CAB3P36076 571 aa4.99□□□□□ -1.61
ROT1YMR200W CDS1P38221 457 aa4.99□□□□□ -1.61
ROT1YMR200W OTU2P38747 307 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W CTM1P38818 585 aa4.99□□□□□ -1.61
ROT1YMR200W HRB1P38922 454 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
ROT1YMR200W REV7P38927 245 aa4.99□□□□□ -1.61
ROT1YMR200W PXA1P41909 870 aa4.99□□□□□ -1.61
ROT1YMR200W EPL1P43572 832 aa4.99□□□□□ -1.61
ROT1YMR200W PAN2P53010 1115 aaPredicted RBP4.99□□□□□ -1.61
ROT1YMR200W RPN14P53196 417 aa4.99□□□□□ -1.61
ROT1YMR200W PDR16P53860 351 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W NGL2Q03264 515 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W TRS31Q03337 283 aa4.99□□□□□ -1.61
ROT1YMR200W PPN1Q04119 674 aa4.99□□□□□ -1.61
ROT1YMR200W TMA16Q08687 178 aa4.99□□□□□ -1.61
ROT1YMR200W CHS5Q12114 671 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W PFK27Q12471 397 aaPredicted RBP4.99□□□□□ -1.61
ROT1YMR200W YJR112W-AQ3E743 109 aa4.99□□□□□ -1.61
ROT1YMR200W HRP1Q99383 534 aaKnown RBP4.99□□□□□ -1.61
ROT1YMR200W DFR1P07807 211 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
ROT1YMR200W MER1P16523 270 aa4.98□□□□□ -1.61
ROT1YMR200W PHO91P27514 894 aa4.98□□□□□ -1.61
ROT1YMR200W NTG1P31378 399 aa4.98□□□□□ -1.61
ROT1YMR200W YUH1P35127 236 aa4.98□□□□□ -1.61
ROT1YMR200W MRPL40P36534 297 aa4.98□□□□□ -1.61
ROT1YMR200W MAL33P38157 468 aa4.98□□□□□ -1.61
ROT1YMR200W YSW1P38280 609 aa4.98□□□□□ -1.61
ROT1YMR200W WSS1P38838 269 aa4.98□□□□□ -1.61
ROT1YMR200W YIL089WP40500 205 aa4.98□□□□□ -1.61
ROT1YMR200W CUE3P53137 624 aaKnown RBP4.98□□□□□ -1.61
ROT1YMR200W YGR066CP53242 292 aa4.98□□□□□ -1.61
ROT1YMR200W YGR266WP53326 701 aa4.98□□□□□ -1.61
ROT1YMR200W TAP42Q04372 366 aa4.98□□□□□ -1.61
ROT1YMR200W ERG27Q12452 347 aaKnown RBP4.98□□□□□ -1.61
ROT1YMR200W YKL033W-AQ86ZR7 236 aa4.98□□□□□ -1.61
ROT1YMR200W PUT4P15380 627 aa4.97□□□□□ -1.61
ROT1YMR200W MVD1P32377 396 aaKnown RBP4.97□□□□□ -1.61
ROT1YMR200W PPZ2P33329 710 aa4.97□□□□□ -1.61
ROT1YMR200W SRB2P34162 210 aa4.97□□□□□ -1.61
ROT1YMR200W SEF1P34228 1148 aa4.97□□□□□ -1.61
ROT1YMR200W CCL1P37366 393 aa4.97□□□□□ -1.61
ROT1YMR200W CST26P38226 397 aa4.97□□□□□ -1.61
ROT1YMR200W COS111P38308 924 aa4.97□□□□□ -1.61
ROT1YMR200W SFB3P38810 929 aa4.97□□□□□ -1.61
ROT1YMR200W YDR089WP38966 869 aa4.97□□□□□ -1.61
ROT1YMR200W CAK1P43568 368 aaPredicted RBP4.97□□□□□ -1.61
ROT1YMR200W ASE1P50275 885 aa4.97□□□□□ -1.61
ROT1YMR200W ALT2P52892 507 aa4.97□□□□□ -1.61
ROT1YMR200W YGR111WP53265 400 aa4.97□□□□□ -1.61
ROT1YMR200W INN1P53901 409 aa4.97□□□□□ -1.61
ROT1YMR200W YPL108WQ02872 168 aaPredicted RBP4.97□□□□□ -1.61
ROT1YMR200W YEH1Q07804 573 aa4.97□□□□□ -1.61
ROT1YMR200W DCI1Q08558 271 aa4.97□□□□□ -1.61
ROT1YMR200W CLP1Q08685 445 aaPredicted RBP4.97□□□□□ -1.61
ROT1YMR200W ATG29Q12092 213 aa4.97□□□□□ -1.61
ROT1YMR200W RUD3Q12234 484 aaKnown RBP4.97□□□□□ -1.61
ROT1YMR200W VCX1Q99385 411 aa4.97□□□□□ -1.61
ROT1YMR200W GAL7P08431 366 aa4.96□□□□□ -1.62
ROT1YMR200W RPL1AP0CX43 217 aaKnown RBP4.96□□□□□ -1.62
ROT1YMR200W RPL1BP0CX44 217 aaKnown RBP4.96□□□□□ -1.62
ROT1YMR200W CDC43P18898 376 aa4.96□□□□□ -1.62
ROT1YMR200W PRE4P30657 266 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms