RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C NMD5P46970 1048 aa4.73□□□□□ -1.65
EAR1YMR171C SHR3Q02774 210 aa4.73□□□□□ -1.65
EAR1YMR171C MTG1Q03151 367 aaPredicted RBP4.73□□□□□ -1.65
EAR1YMR171C USA1Q03714 838 aa4.73□□□□□ -1.65
EAR1YMR171C TDA9Q04545 1251 aa4.73□□□□□ -1.65
EAR1YMR171C YDL057WQ07379 328 aa4.73□□□□□ -1.65
EAR1YMR171C YKL033W-AQ86ZR7 236 aa4.73□□□□□ -1.65
EAR1YMR171C YMR085WP0CF18 432 aa4.73□□□□□ -1.65
EAR1YMR171C SEC14P24280 304 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C YCR015CP25616 317 aa4.73□□□□□ -1.65
EAR1YMR171C CDS1P38221 457 aa4.73□□□□□ -1.65
EAR1YMR171C RRT2P38332 387 aa4.73□□□□□ -1.65
EAR1YMR171C MMS21P38632 267 aa4.73□□□□□ -1.65
EAR1YMR171C PIG2P40187 538 aa4.73□□□□□ -1.65
EAR1YMR171C AIM21P40563 679 aa4.73□□□□□ -1.65
EAR1YMR171C TMA22P47089 198 aaPredicted RBP4.73□□□□□ -1.65
EAR1YMR171C BRO1P48582 844 aa4.73□□□□□ -1.65
EAR1YMR171C RFX1P48743 811 aa4.73□□□□□ -1.65
EAR1YMR171C SUN4P53616 420 aa4.73□□□□□ -1.65
EAR1YMR171C SUB1P54000 292 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C MLC2Q06580 163 aa4.73□□□□□ -1.65
EAR1YMR171C YFT2Q06676 274 aa4.73□□□□□ -1.65
EAR1YMR171C RLP24Q07915 199 aaKnown RBP4.73□□□□□ -1.65
EAR1YMR171C RIF1P29539 1916 aa4.72□□□□□ -1.65
EAR1YMR171C RAD3P06839 778 aa4.72□□□□□ -1.65
EAR1YMR171C CLN3P13365 580 aa4.72□□□□□ -1.65
EAR1YMR171C SAM2P19358 384 aaKnown RBP4.72□□□□□ -1.65
EAR1YMR171C MRPL25P23369 157 aa4.72□□□□□ -1.65
EAR1YMR171C PTP2P29461 750 aa4.72□□□□□ -1.65
EAR1YMR171C DBF4P32325 704 aa4.72□□□□□ -1.65
EAR1YMR171C ZUO1P32527 433 aaKnown RBP4.72□□□□□ -1.65
EAR1YMR171C MRE11P32829 692 aa4.72□□□□□ -1.65
EAR1YMR171C PHO11P35842 467 aa4.72□□□□□ -1.65
EAR1YMR171C UBP13P38187 747 aa4.72□□□□□ -1.65
EAR1YMR171C PHO12P38693 467 aa4.72□□□□□ -1.65
EAR1YMR171C TDA10P42938 290 aa4.72□□□□□ -1.65
EAR1YMR171C MDR1P53258 950 aa4.72□□□□□ -1.65
EAR1YMR171C TAF9Q05027 157 aa4.72□□□□□ -1.65
EAR1YMR171C CUR1Q06469 252 aa4.72□□□□□ -1.65
EAR1YMR171C SUE1Q06524 206 aa4.72□□□□□ -1.65
EAR1YMR171C CHS5Q12114 671 aaKnown RBP4.72□□□□□ -1.65
EAR1YMR171C RRG1Q12167 365 aaPredicted RBP4.72□□□□□ -1.65
EAR1YMR171C CDC33P07260 213 aaKnown RBP4.71□□□□□ -1.66
EAR1YMR171C HMG2P12684 1045 aa4.71□□□□□ -1.66
EAR1YMR171C KAR3P17119 729 aa4.71□□□□□ -1.66
EAR1YMR171C HOP1P20050 605 aa4.71□□□□□ -1.66
EAR1YMR171C MRPS28P21771 286 aa4.71□□□□□ -1.66
EAR1YMR171C PRP28P23394 588 aa4.71□□□□□ -1.66
EAR1YMR171C PHO3P24031 467 aa4.71□□□□□ -1.66
EAR1YMR171C BUD14P27637 709 aa4.71□□□□□ -1.66
EAR1YMR171C SSE1P32589 693 aaKnown RBP4.71□□□□□ -1.66
EAR1YMR171C YKL222CP35995 705 aa4.71□□□□□ -1.66
EAR1YMR171C CCL1P37366 393 aa4.71□□□□□ -1.66
EAR1YMR171C YBR062CP38239 180 aa4.71□□□□□ -1.66
EAR1YMR171C FZO1P38297 855 aa4.71□□□□□ -1.66
EAR1YMR171C VHC1P38329 1120 aa4.71□□□□□ -1.66
EAR1YMR171C END3P39013 349 aa4.71□□□□□ -1.66
EAR1YMR171C FTR1P40088 404 aa4.71□□□□□ -1.66
EAR1YMR171C FMS1P50264 508 aa4.71□□□□□ -1.66
EAR1YMR171C MNT2P53059 558 aa4.71□□□□□ -1.66
EAR1YMR171C FHN1P53279 174 aa4.71□□□□□ -1.66
EAR1YMR171C YNL144CP53907 740 aa4.71□□□□□ -1.66
EAR1YMR171C TIM8P57744 87 aa4.71□□□□□ -1.66
EAR1YMR171C CEG1Q01159 459 aaPredicted RBP4.71□□□□□ -1.66
EAR1YMR171C ATG16Q03818 150 aa4.71□□□□□ -1.66
EAR1YMR171C MLH3Q12083 715 aa4.71□□□□□ -1.66
EAR1YMR171C RTK1Q12100 620 aaPredicted RBP4.71□□□□□ -1.66
EAR1YMR171C VPS5Q92331 675 aa4.71□□□□□ -1.66
EAR1YMR171C TUB2P02557 457 aaKnown RBP4.7□□□□□ -1.66
EAR1YMR171C PEP5P12868 1029 aa4.7□□□□□ -1.66
EAR1YMR171C RMA1P36001 430 aaKnown RBP4.7□□□□□ -1.66
EAR1YMR171C YBL028CP38202 106 aa4.7□□□□□ -1.66
EAR1YMR171C YTA12P40341 825 aa4.7□□□□□ -1.66
EAR1YMR171C HIS6P40545 261 aa4.7□□□□□ -1.66
EAR1YMR171C MSE1P48525 536 aa4.7□□□□□ -1.66
EAR1YMR171C TEL2P53038 688 aa4.7□□□□□ -1.66
EAR1YMR171C PEF1P53238 335 aa4.7□□□□□ -1.66
EAR1YMR171C YGR111WP53265 400 aa4.7□□□□□ -1.66
EAR1YMR171C SQS1P53866 767 aaKnown RBP4.7□□□□□ -1.66
EAR1YMR171C SPO19Q03029 223 aa4.7□□□□□ -1.66
EAR1YMR171C HOT1Q03213 719 aa4.7□□□□□ -1.66
EAR1YMR171C DON1Q05610 365 aa4.7□□□□□ -1.66
EAR1YMR171C YLR177WQ06251 628 aa4.7□□□□□ -1.66
EAR1YMR171C GCD2P12754 651 aaPredicted RBP4.7□□□□□ -1.66
EAR1YMR171C PMS1P14242 873 aa4.7□□□□□ -1.66
EAR1YMR171C PWP1P21304 576 aaKnown RBP4.7□□□□□ -1.66
EAR1YMR171C CLB4P24871 460 aa4.7□□□□□ -1.66
EAR1YMR171C MSS1P32559 526 aaPredicted RBP4.7□□□□□ -1.66
EAR1YMR171C TOA1P32773 286 aa4.7□□□□□ -1.66
EAR1YMR171C YBL055CP34220 418 aaPredicted RBP4.7□□□□□ -1.66
EAR1YMR171C MSG5P38590 489 aa4.7□□□□□ -1.66
EAR1YMR171C SAW1P39735 261 aa4.7□□□□□ -1.66
EAR1YMR171C YIL001WP40560 513 aa4.7□□□□□ -1.66
EAR1YMR171C MAD2P40958 196 aa4.7□□□□□ -1.66
EAR1YMR171C EAF6P47128 113 aa4.7□□□□□ -1.66
EAR1YMR171C ASK10P48361 1146 aa4.7□□□□□ -1.66
EAR1YMR171C YDL183CP48569 320 aa4.7□□□□□ -1.66
EAR1YMR171C TAN1P53072 289 aaPredicted RBP4.7□□□□□ -1.66
EAR1YMR171C NNF2P53253 936 aa4.7□□□□□ -1.66
EAR1YMR171C ERV41Q04651 352 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms